RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 KRT33BQ14525 404 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 GSE1Q14687 1217 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 ARMC6Q6NXE6 501 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 RANBP10Q6VN20 620 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 RAD9BQ6WBX8 426 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 FAM92BQ6ZTR7 304 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 HEXDCQ8WVB3 486 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 STAMBPL1Q96FJ0 436 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 SLC45A3Q96JT2 553 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 OR6C1Q96RD1 312 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 SIDT1Q9NXL6 827 aaKnown RBP17.56■□□□□ 0.4
PNKP-225ENST00000636214 FAM8A1Q9UBU6 413 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 ACSL5Q9ULC5 683 aa17.56■□□□□ 0.4
PNKP-225ENST00000636214 TMEM184BQ9Y519 407 aaPredicted RBP17.56■□□□□ 0.4
PNKP-225ENST00000636214 ZNF106Q9H2Y7 1883 aaKnown RBP17.56■□□□□ 0.4
PNKP-225ENST00000636214 GRID2IPA4D2P6 1211 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 MGAT4DA6NG13 374 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 GAPDHSO14556 408 aaPredicted RBP17.55■□□□□ 0.4
PNKP-225ENST00000636214 SLC35G4P0C7Q5 338 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 MTHFD1P11586 935 aaKnown RBP17.55■□□□□ 0.4
PNKP-225ENST00000636214 ADRA1AP35348 466 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 CCR10P46092 362 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 MAP7Q14244 749 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 IL11RAQ14626 422 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 PTPRCAPQ14761 206 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 RPE65Q16518 533 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 ALG3Q92685 438 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 C12orf66Q96MD2 445 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 ALS2CR12Q96Q35 445 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 LACRTQ9GZZ8 138 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 ADNPQ9H2P0 1102 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 PDE7BQ9NP56 450 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 EPHA6Q9UF33 1036 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 LNPEPQ9UIQ6 1025 aa17.55■□□□□ 0.4
PNKP-225ENST00000636214 REXO2Q9Y3B8 237 aaKnown RBP17.55■□□□□ 0.4
PNKP-225ENST00000636214 BOD1L1Q8NFC6 3051 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 LOC101059948A0A1B0GTJ6 334 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 PRKAR1AP10644 381 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 SH3BP2P78314 561 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 P3H1Q32P28 736 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 AADACL2Q6P093 401 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 ZNF449Q6P9G9 518 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 C6orf15Q6UXA7 325 aaPredicted RBP17.54■□□□□ 0.4
PNKP-225ENST00000636214 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
PNKP-225ENST00000636214 OOSP2Q86WS3 158 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 PPP1R3BQ86XI6 285 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 UNC5BQ8IZJ1 945 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 LRRC57Q8N9N7 239 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 SIDT2Q8NBJ9 832 aaKnown RBP17.54■□□□□ 0.4
PNKP-225ENST00000636214 OR13C4Q8NGS5 318 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 GPR150Q8NGU9 434 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 OR2L2Q8NH16 312 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 UBXN4Q92575 508 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 ELMO2Q96JJ3 720 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 COPS8Q99627 209 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 GORASP1Q9BQQ3 440 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 RAB33BQ9H082 229 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 WWP1Q9H0M0 922 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 VPS37BQ9H9H4 285 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 KCTD3Q9Y597 815 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 PCDHB3Q9Y5E6 796 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 CFAP20Q9Y6A4 193 aaKnown RBP17.54■□□□□ 0.4
PNKP-225ENST00000636214 RPS6KL1Q9Y6S9 549 aa17.54■□□□□ 0.4
PNKP-225ENST00000636214 UBA6A0AVT1 1052 aaPredicted RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 KIF1CO43896 1103 aaKnown RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 DLGAP3O95886 979 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 CCNYL3P0C7X3 344 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 NDUFS1P28331 727 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 OLIG2Q13516 323 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 SEPT6Q14141 434 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 BCL7AQ4VC05 210 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 DNTTIP2Q5QJE6 756 aaKnown RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 METRNLQ641Q3 311 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 TIPARPQ7Z3E1 657 aaKnown RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 SNX20Q7Z614 316 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 FAM71DQ8N9W8 422 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 STARD8Q92502 1023 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 SLC25A18Q9H1K4 315 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 LRRC40Q9H9A6 602 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 GEMIN8Q9NWZ8 242 aaKnown RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 RARRES3Q9UL19 164 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 HEBP2Q9Y5Z4 205 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 COLEC10Q9Y6Z7 277 aa17.53■□□□□ 0.4
PNKP-225ENST00000636214 FLNBO75369 2602 aaKnown RBP17.53■□□□□ 0.4
PNKP-225ENST00000636214 PSMD3O43242 534 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 KIAA0754O94854 1291 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 MT-ND3P03897 115 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 NELFEP18615 380 aaKnown RBP17.52■□□□□ 0.4
PNKP-225ENST00000636214 TCN2P20062 427 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 STAT5AP42229 794 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 ZNF140P52738 457 aaPredicted RBP17.52■□□□□ 0.4
PNKP-225ENST00000636214 ACY1Q03154 408 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 CDC20Q12834 499 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 PRKAA1Q13131 559 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 TUBB3Q13509 450 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 PARP6Q2NL67 630 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms