RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ATP13A2Q9NQ11 1180 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 SOHLH2Q9NX45 425 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 RPL26L1Q9UNX3 145 aaKnown RBP17.68■□□□□ 0.42
CLN6-212ENST00000636020 CYP2A7P20853 494 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 AMPD1P23109 780 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 OTUD4Q01804 1114 aaKnown RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 DSC2Q02487 901 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 ADCY2Q08462 1091 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 ZNF169Q14929 603 aaPredicted RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 RPE65Q16518 533 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 ZNF385CQ66K41 422 aaPredicted RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 B3GNTL1Q67FW5 361 aaPredicted RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 FCRL6Q6DN72 434 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 ALG1LQ6GMV1 187 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 DUS1LQ6P1R4 473 aaKnown RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 PSTKQ8IV42 348 aaKnown RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 LPCAT1Q8NF37 534 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 EID2BQ96D98 161 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 CCDC120Q96HB5 630 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 FANCEQ9HB96 536 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 SUCOQ9UBS9 1254 aaKnown RBP17.67■□□□□ 0.42
CLN6-212ENST00000636020 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
CLN6-212ENST00000636020 MTX2O75431 263 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 CDK14O94921 469 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 PSMA2P25787 234 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 KPNA2P52292 529 aaKnown RBP17.66■□□□□ 0.42
CLN6-212ENST00000636020 JAM2P57087 298 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 KCNK10P57789 538 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 KHDC1Q4VXA5 237 aaKnown RBP17.66■□□□□ 0.42
CLN6-212ENST00000636020 GPR26Q8NDV2 337 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 ZSCAN5AQ9BUG6 496 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 ZWILCHQ9H900 591 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 PCDH9Q9HC56 1237 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 SYTL2Q9HCH5 934 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 OLAHQ9NV23 265 aa17.66■□□□□ 0.42
CLN6-212ENST00000636020 ZNF469Q96JG9 3925 aaPredicted RBP17.66■□□□□ 0.42
CLN6-212ENST00000636020 TMEM150CB9EJG8 249 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 PES1O00541 588 aaKnown RBP17.65■□□□□ 0.42
CLN6-212ENST00000636020 KCNN4O15554 427 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 PRPSAP2O60256 369 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 VCLP18206 1134 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 AGXTP21549 392 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 CES1P23141 567 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 MIPP30301 263 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 ARCN1P48444 511 aaKnown RBP17.65■□□□□ 0.42
CLN6-212ENST00000636020 QPCTQ16769 361 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 PDPK2PQ6A1A2 396 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 ZNF324BQ6AW86 544 aaPredicted RBP17.65■□□□□ 0.42
CLN6-212ENST00000636020 FAM180AQ6UWF9 173 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 OOSP2Q86WS3 158 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.65■□□□□ 0.42
CLN6-212ENST00000636020 TRAM1L1Q8N609 369 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 BCORP1Q8N888 145 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 GBP5Q96PP8 586 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 NUP85Q9BW27 656 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 PTRH2Q9Y3E5 179 aaKnown RBP17.65■□□□□ 0.42
CLN6-212ENST00000636020 ANKRD12Q6UB98 2062 aa17.65■□□□□ 0.42
CLN6-212ENST00000636020 SLC9B1P1A6NJY1 282 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 H3BRJ5 948 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 PCDH17O14917 1159 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 MSL3P1P0C860 447 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 CD1EP15812 388 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 DCDC1P59894 354 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 POLR2FP61218 127 aaKnown RBP17.64■□□□□ 0.41
CLN6-212ENST00000636020 AIMP2Q13155 320 aaKnown RBP17.64■□□□□ 0.41
CLN6-212ENST00000636020 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
CLN6-212ENST00000636020 MLIPQ5VWP3 458 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 RPTNQ6XPR3 784 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 PPP1R32Q7Z5V6 425 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 MCOLN2Q8IZK6 566 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 ARRDC2Q8TBH0 407 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 C14orf79Q96F83 325 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 SLC7A5P2Q9GIP4 190 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 SERTAD3Q9UJW9 196 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 PSMD13Q9UNM6 376 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 PCM1Q15154 2024 aa17.64■□□□□ 0.41
CLN6-212ENST00000636020 CCDC78A2IDD5 438 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 OR6C74A6NCV1 312 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 ANKRD66B4E2M5 251 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 ZNF749O43361 778 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 KCNJ13O60928 360 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 NADKO95544 446 aaPredicted RBP17.63■□□□□ 0.41
CLN6-212ENST00000636020 CA4P22748 312 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 FOLR3P41439 243 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 TDGF1P3P51864 188 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 TLR1Q15399 786 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 ARMC6Q6NXE6 501 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 RPUSD3Q6P087 351 aaKnown RBP17.63■□□□□ 0.41
CLN6-212ENST00000636020 B4GALNT4Q76KP1 1039 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 TRAPPC5Q8IUR0 188 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 CNDP1Q96KN2 507 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 C17orf62Q9BQA9 187 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 NLRC4Q9NPP4 1024 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 C1GALT1Q9NS00 363 aa17.63■□□□□ 0.41
CLN6-212ENST00000636020 NFKBIL1Q9UBC1 381 aaPredicted RBP17.63■□□□□ 0.41
CLN6-212ENST00000636020 TMPRSS11EQ9UL52 423 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms