RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 AK4P27144 223 aaPredicted RBP14.47□□□□□ -0.09
PNKP-221ENST00000627317 ACTR1BP42025 376 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 SLC1A2P43004 574 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 PRLHRP49683 370 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 ACTR1AP61163 376 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 MGAT5Q09328 741 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 DEFB133Q30KQ1 61 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 CCDC157Q569K6 752 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 ZCCHC8Q6NZY4 707 aaKnown RBP14.47□□□□□ -0.09
PNKP-221ENST00000627317 TRMT10BQ6PF06 316 aaKnown RBP14.47□□□□□ -0.09
PNKP-221ENST00000627317 SLC30A9Q6PML9 568 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 TMPRSS12Q86WS5 348 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 LRRC6Q86X45 466 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 ZNF547Q8IVP9 402 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 DENND6AQ8IWF6 608 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 SDR16C5Q8N3Y7 309 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 CLDN19Q8N6F1 224 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 CCL4L1Q8NHW4 92 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 GPBAR1Q8TDU6 330 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 DUSP23Q9BVJ7 150 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 ANKZF1Q9H8Y5 726 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 INTS10Q9NVR2 710 aaKnown RBP14.47□□□□□ -0.09
PNKP-221ENST00000627317 ZFATQ9P243 1243 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 GNPTGQ9UJJ9 305 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 FBXO5Q9UKT4 447 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 KCNK6Q9Y257 313 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 DNAJC16Q9Y2G8 782 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 PLEKHM1Q9Y4G2 1056 aa14.47□□□□□ -0.09
PNKP-221ENST00000627317 TAF4O00268 1085 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 POP7O75817 140 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 FTH1P02794 183 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 MYF5P13349 255 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 TNFRSF8P28908 595 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 SSTR1P30872 391 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 STX2P32856 288 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 INSM1Q01101 510 aaPredicted RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 CTBP1Q13363 440 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 SLMAPQ14BN4 828 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 HES3Q5TGS1 186 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 PTRHD1Q6GMV3 140 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 C3orf62Q6ZUJ4 267 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 AMZ2Q86W34 360 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 GSPT2Q8IYD1 628 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 CACTIN-AS1Q8N1I8 211 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 BEND7Q8N7W2 519 aaPredicted RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 EIF1ADQ8N9N8 165 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 FAM46DQ8NEK8 389 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 ZCCHC14Q8WYQ9 949 aaKnown RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 LPGAT1Q92604 370 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 FBXO6Q9NRD1 293 aaPredicted RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 KLC4Q9NSK0 619 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 DKK4Q9UBT3 224 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 FAM8A1Q9UBU6 413 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 ZMIZ1Q9ULJ6 1067 aa14.46□□□□□ -0.09
PNKP-221ENST00000627317 DNMT3AQ9Y6K1 912 aaPredicted RBP14.46□□□□□ -0.09
PNKP-221ENST00000627317 TCRBV9S1A1TA0A576 114 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 KLHL33A6NCF5 533 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 B4DGG1 531 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 YY2O15391 372 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 SGTAO43765 313 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 KCNJ13O60928 360 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 GP1BAP07359 652 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 GSTM1P09488 218 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 PHBP35232 272 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 MPP1Q00013 466 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 GSTM4Q03013 218 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 C6orf132Q5T0Z8 1188 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CDCP2Q5VXM1 449 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 LVRNQ6Q4G3 990 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 KIAA0408Q6ZU52 694 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 C11orf96Q7Z7L8 435 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 NRROSQ86YC3 692 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 RELL1Q8IUW5 271 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CNTN4Q8IWV2 1026 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 SLC35F3Q8IY50 421 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 DCBLD1Q8N8Z6 715 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 C2CD4AQ8NCU7 369 aaPredicted RBP14.45□□□□□ -0.1
PNKP-221ENST00000627317 HM13Q8TCT9 377 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CDKL2Q92772 493 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CCDC68Q9H2F9 335 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CDC42EP4Q9H3Q1 356 aaKnown RBP14.45□□□□□ -0.1
PNKP-221ENST00000627317 DPEP2Q9H4A9 486 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 RRAGDQ9NQL2 400 aaPredicted RBP14.45□□□□□ -0.1
PNKP-221ENST00000627317 NSMCE4AQ9NXX6 385 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 MOCS1Q9NZB8 636 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 NINJ2Q9NZG7 142 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 TAAR2Q9P1P5 351 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 SLC17A6Q9P2U8 582 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 SLC23A2Q9UGH3 650 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 CRYL1Q9Y2S2 319 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 PCDHB1Q9Y5F3 818 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 PRSS21Q9Y6M0 314 aa14.45□□□□□ -0.1
PNKP-221ENST00000627317 APC2O95996 2303 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 MGAT4DA6NG13 374 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 PDZK1P1A8MUH7 402 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 H3BMM5 538 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 SNX2O60749 519 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms