RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 VPS4AQ9UN37 437 aa10.79□□□□□ -0.68
DDX41-218ENST00000625286 PCDHGA9Q9Y5G4 932 aaKnown RBP10.79□□□□□ -0.68
DDX41-218ENST00000625286 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 OR2AG2A6NM03 316 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 F5H423 210 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 SGTAO43765 313 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 LPOP22079 712 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 COL8A1P27658 744 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 HNRNPH3P31942 346 aaKnown RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 PGDP52209 483 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 TUBB4BP68371 445 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 HSD11B2P80365 405 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 ABRQ12979 859 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 TUBB2AQ13885 445 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 INPP5JQ15735 1006 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 SLC14A2Q15849 920 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 EIF2S3LQ2VIR3 472 aaKnown RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 ZNF789Q5FWF6 425 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 SIRPB2Q5JXA9 342 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 FHL5Q5TD97 284 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 JMJD6Q6NYC1 403 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 FAM151BQ6UXP7 276 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 SYVN1Q86TM6 617 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 LUZP1Q86V48 1076 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 TMEM151BQ8IW70 566 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 LILRA3Q8N6C8 439 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 RBMXL3Q8N7X1 1067 aaKnown RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 FDCSPQ8NFU4 85 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 GDAP1Q8TB36 358 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 SLC35G2Q8TBE7 412 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 THAP4Q8WY91 577 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 C19orf60Q96EN9 201 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 OXNAD1Q96HP4 312 aaPredicted RBP10.78□□□□□ -0.68
DDX41-218ENST00000625286 MRGPRX2Q96LB1 330 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 NUDT9Q9BW91 350 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 CBX8Q9HC52 389 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 HRASLS2Q9NWW9 162 aa10.78□□□□□ -0.68
DDX41-218ENST00000625286 TEP1Q99973 2627 aaKnown RBP10.77□□□□□ -0.68
DDX41-218ENST00000625286 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 A1L4Q6 167 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 OR6C74A6NCV1 312 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 TLCD2A6NGC4 264 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 ZNF487B1APH4 448 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 APOL1O14791 398 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 KCNJ13O60928 360 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 SCRG1O75711 98 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 CLDN1O95832 211 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 H2AFZP0C0S5 128 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 PECAM1P16284 738 aaPredicted RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 RORAP35398 523 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 WNT3AP56704 352 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 DYNLT1P63172 113 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 ACY1Q03154 408 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 PDK1Q15118 436 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 LLGL1Q15334 1064 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 GPRC6AQ5T6X5 926 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 IZUMO3Q5VZ72 239 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 MFSD7Q6UXD7 560 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 H2AFVQ71UI9 128 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 BPHLQ86WA6 291 aaPredicted RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 KMT5CQ86Y97 462 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 ZBTB2Q8N680 514 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 DDHD1Q8NEL9 900 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 BRSK1Q8TDC3 778 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 MR1Q95460 341 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 TCTN2Q96GX1 697 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 ZNF830Q96NB3 372 aaPredicted RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 GBP4Q96PP9 640 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 GORASP1Q9BQQ3 440 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 WWP1Q9H0M0 922 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 IMP3Q9NV31 184 aaKnown RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 LUC7L2Q9Y383 392 aaKnown RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 HYOU1Q9Y4L1 999 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 DNMT3AQ9Y6K1 912 aaPredicted RBP10.77□□□□□ -0.69
DDX41-218ENST00000625286 POLEQ07864 2286 aa10.77□□□□□ -0.69
DDX41-218ENST00000625286 UBA6A0AVT1 1052 aaPredicted RBP10.76□□□□□ -0.69
DDX41-218ENST00000625286 WIPF3A6NGB9 483 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 SLC9B1P1A6NJY1 282 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 MEN1O00255 615 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 KRT86O43790 486 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 CPNE3O75131 537 aaKnown RBP10.76□□□□□ -0.69
DDX41-218ENST00000625286 MBD3O95983 291 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 VCLP18206 1134 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 NFKB1P19838 968 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 PBLDP30039 288 aaPredicted RBP10.76□□□□□ -0.69
DDX41-218ENST00000625286 SPAM1P38567 509 aa10.76□□□□□ -0.69
DDX41-218ENST00000625286 HALP42357 657 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms