RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RASGRP3Q8IV61 690 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 FBXO15Q8NCQ5 510 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 OR2T34Q8NGX1 318 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 OR2T3Q8NH03 318 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 DGCR14Q96DF8 476 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 AGXT2Q9BYV1 514 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 ANXA4P09525 319 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PKMP14618 531 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 SATL1Q86VE3 508 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 CRYBG2Q8N1P7 616 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF548Q8NEK5 533 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PDCD5O14737 125 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 MEIS2O14770 477 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 AP2A2O94973 939 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PIM1P11309 404 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NSG1P42857 185 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NDST2P52849 883 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 YBEYP58557 167 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 VITQ6UXI7 678 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 TWIST2Q8WVJ9 160 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NKD1Q969G9 470 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 SHDQ96IW2 340 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 DHRS1Q96LJ7 313 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 APOLD1Q96LR9 279 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 GLS2Q9UI32 602 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 AK5Q9Y6K8 562 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 OR7A10O76100 309 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 ACVR2AP27037 513 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 SLC7A1P30825 629 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 MPIP34949 423 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 CCR10P46092 362 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 RPL5P46777 297 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 CCR8P51685 355 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PGDP52209 483 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 SERINC1Q9NRX5 453 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NME6O75414 186 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 SGCBQ16585 318 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 TIGD2Q4W5G0 525 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 KCTD8Q6ZWB6 473 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PPM1MQ96MI6 270 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 TSSK3Q96PN8 268 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 LGR4Q9BXB1 951 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 PLK2Q9NYY3 685 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 NR2E1Q9Y466 385 aa11.04□□□□□ -0.64
CCDC144B-208ENST00000618081 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AREL1O15033 823 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TCEA1P23193 301 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ARCN1P48444 511 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF615Q8N8J6 731 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ATAD1Q8NBU5 361 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AIFM2Q9BRQ8 373 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 MECRQ9BV79 373 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 FAM83DQ9H4H8 585 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GMEB1Q9Y692 573 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF726A6NNF4 738 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 SNX3O60493 162 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TULP3O75386 442 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PRH1P02810 166 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AP1S1P61966 158 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 NOMO3P69849 1222 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 UBXN2BQ14CS0 331 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF662Q6ZS27 426 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 DNAJB7Q7Z6W7 309 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 MAGEH1Q9H213 219 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 NOL11Q9H8H0 719 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TIMMDC1Q9NPL8 285 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PLLPQ9Y342 182 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 OR2AG2A6NM03 316 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 H0YGN5 161 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 FFAR2O15552 330 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 EOMESO95936 686 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TMEM44Q2T9K0 475 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 THAP5Q7Z6K1 395 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 SLCO6A1Q86UG4 719 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 LIX1Q8N485 282 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 BRSK1Q8TDC3 778 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GDAP2Q9NXN4 497 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 METTL21EPA6NDL7 271 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 LRRC46Q96FV0 321 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 MED28Q9H204 178 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 CLCA3PQ9Y6N3 262 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZFP37Q9Y6Q3 630 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ENTPD5O75356 428 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AP2A1O95782 977 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GAD2Q05329 585 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF567Q8N184 647 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PARP8Q8N3A8 854 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 IL25Q9H293 177 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms