RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 C10orf88Q9H8K7 445 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 STARD5Q9NSY2 213 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 GEMIN8Q9NWZ8 242 aaKnown RBP9.48□□□□□ -0.89
TARDBP-218ENST00000617172 SIDT1Q9NXL6 827 aaKnown RBP9.48□□□□□ -0.89
TARDBP-218ENST00000617172 SEMA5BQ9P283 1151 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 TRIM10Q9UDY6 481 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 TUBD1Q9UJT1 453 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 REXO2Q9Y3B8 237 aaKnown RBP9.48□□□□□ -0.89
TARDBP-218ENST00000617172 COLEC10Q9Y6Z7 277 aa9.48□□□□□ -0.89
TARDBP-218ENST00000617172 C17orf113A0A1B0GUU1 675 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 DLGAP3O95886 979 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 MT-ND3P03897 115 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 NELFEP18615 380 aaKnown RBP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 ITGALP20701 1170 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 NDUFS1P28331 727 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 STIP1P31948 543 aaKnown RBP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 CCR10P46092 362 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 SEPHS1P49903 392 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 CYP4F2P78329 520 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 XIAPP98170 497 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 MSLNQ13421 630 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 NFE2L1Q14494 772 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 PLCL1Q15111 1095 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 P3H1Q32P28 736 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 IRGCQ6NXR0 463 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 ZNF449Q6P9G9 518 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 C6orf15Q6UXA7 325 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 SNX20Q7Z614 316 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 KMT5CQ86Y97 462 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 KLHDC8BQ8IXV7 354 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 CARFQ8N187 725 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 RSC1A1Q92681 617 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 OR6C1Q96RD1 312 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 CD180Q99467 661 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 TBL1YQ9BQ87 522 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 APOL2Q9BQE5 337 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 GORASP1Q9BQQ3 440 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 SLC25A18Q9H1K4 315 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 LRRC40Q9H9A6 602 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 VPS37BQ9H9H4 285 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 APMAPQ9HDC9 416 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 PDE7BQ9NP56 450 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 CRLS1Q9UJA2 301 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 PSMD13Q9UNM6 376 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 PCDHB3Q9Y5E6 796 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 HEMK1Q9Y5R4 338 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-218ENST00000617172 HEBP2Q9Y5Z4 205 aa9.47□□□□□ -0.89
TARDBP-218ENST00000617172 SCN8AQ9UQD0 1980 aa9.46□□□□□ -0.89
TARDBP-218ENST00000617172 LOC101059948A0A1B0GTJ6 334 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 UBA6A0AVT1 1052 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GOLGA6L3A6NEY3 463 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 H7C0S8 307 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GPR39O43194 453 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 RECKO95980 971 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GSTM1P09488 218 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 SLC35G4P0C7Q5 338 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 FAM87AP0C7U9 286 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 MTHFD1P11586 935 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 FGF5P12034 268 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ATP1B2P14415 290 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ITGB6P18564 788 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 CDC25BP30305 580 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 STAT5AP42229 794 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 LEPRP48357 1165 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 PRLHRP49683 370 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ZNF140P52738 457 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GSTM4Q03013 218 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ACY1Q03154 408 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 NFATC3Q12968 1075 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 KRT33BQ14525 404 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 GSE1Q14687 1217 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 PTPRCAPQ14761 206 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 KCTD11Q693B1 232 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 DENND5AQ6IQ26 1287 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ARMC6Q6NXE6 501 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 FAM83HQ6ZRV2 1179 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 DET1Q7L5Y6 550 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 LINC00523Q86TU6 105 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 PPP1R3BQ86XI6 285 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 CFAP206Q8IYR0 622 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 NXPE1Q8N323 547 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 FAM71DQ8N9W8 422 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 SIDT2Q8NBJ9 832 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ACRBPQ8NEB7 543 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 SLC41A2Q96JW4 573 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 ALS2CR12Q96Q35 445 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 COPS8Q99627 209 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 FRMD8P1Q9BZ68 369 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 KIR3DX1Q9H7L2 352 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 IMP3Q9NV31 184 aaKnown RBP9.46□□□□□ -0.9
TARDBP-218ENST00000617172 HRASLS2Q9NWW9 162 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms