RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 RAB4AP20338 218 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 OR8K5Q8NH50 307 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 ZNF350Q9GZX5 532 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 OR51V1Q9H2C8 321 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ATP6AP2A0A1C7CYW4 349 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 AGPSO00116 658 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ATP6AP2O75787 350 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CTHP32929 405 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 KIAA0895LQ68EN5 471 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 GJB7Q6PEY0 223 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 L3MBTL4Q8NA19 623 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 PROKR2Q8NFJ6 384 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 A0A1W2PQC6 194 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 LTA4HP09960 611 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 MLLT6P55198 1093 aaPredicted RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 HSPB3Q12988 150 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 MINDY2Q8NBR6 621 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CALML5Q9NZT1 146 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ACAD8Q9UKU7 415 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 BCKDHAP12694 445 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 GNRHRP30968 328 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 EIF5AP63241 154 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ACER1Q8TDN7 264 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ATG4AQ8WYN0 398 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 PDP2Q9P2J9 529 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 IFNA2P01563 188 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 GADD45AP24522 165 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 SLC14A2Q15849 920 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 EIPR1Q53HC9 387 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ANKS1BQ7Z6G8 1248 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 OR7A2PQ8NGA2 310 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 CMKLR1Q99788 373 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 HACD1B0YJ81 288 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ZNF185O15231 689 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 COX4I1P13073 169 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 BGNP21810 368 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 STOMP27105 288 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 S100A10P60903 97 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 SRYQ05066 204 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 LPAL2Q16609 132 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ZNF554Q86TJ5 538 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 OR6C75A6NL08 312 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 KDM4BO94953 1096 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 TMEM11P17152 192 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 FAM131AQ6UXB0 335 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 UTS2BQ765I0 119 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 AZIN2Q96A70 460 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 NMD3Q96D46 503 aaKnown RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 ASPNQ9BXN1 380 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 OTX2P32243 289 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 CYP2C18P33260 490 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 SSTP61278 116 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 LAPTM4BQ86VI4 370 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 IL1RAPQ9NPH3 570 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 A6NHS1 94 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 EPHA3P29320 983 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 CYP4F8P98187 520 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 MCFD2Q8NI22 146 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 FEM1AQ9BSK4 669 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ASB7Q9H672 318 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 TIMMDC1Q9NPL8 285 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 KCTD5Q9NXV2 234 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 GPR37L1O60883 481 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 SLC16A8O95907 504 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 THRBP10828 461 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 RAB28P51157 221 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 MALLQ13021 153 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 AARDQ4LEZ3 155 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 ERICH5Q6P6B1 374 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 DCP2Q8IU60 420 aaKnown RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 SLC43A2Q8N370 569 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 PTGR2Q8N8N7 351 aaPredicted RBP12.5□□□□□ -0.41
TCF4-248ENST00000616053 INO80EQ8NBZ0 244 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms