RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SLC15A4Q8N697 577 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 ZNF680Q8NEM1 530 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 OR6C4Q8NGE1 309 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 E2F7Q96AV8 911 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 TXNDC15Q96J42 360 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 TEKT5Q96M29 485 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 FCRL5Q96RD9 977 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 SNX18Q96RF0 628 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 C19orf43Q9BQ61 176 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 MAGEB5Q9BZ81 275 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 ROPN1BQ9BZX4 212 aaPredicted RBP8.72□□□□□ -1.01
VPS11-206ENST00000614944 ROPN1Q9HAT0 212 aaPredicted RBP8.72□□□□□ -1.01
VPS11-206ENST00000614944 DNMT3BQ9UBC3 853 aaKnown RBP8.72□□□□□ -1.01
VPS11-206ENST00000614944 PPM1HQ9ULR3 514 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 SNX7Q9UNH6 387 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 PRKAB1Q9Y478 270 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 UGT2A1Q9Y4X1 527 aa8.72□□□□□ -1.01
VPS11-206ENST00000614944 A0A1B0GWJ7 208 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 C2orf78A6NCI8 922 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 CDH16O75309 829 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 PTP4A3O75365 173 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 CLN5O75503 358 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 TBX18O95935 607 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 FAM58BPP0C7Q3 252 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 HOXB8P17481 243 aaPredicted RBP8.71□□□□□ -1.01
VPS11-206ENST00000614944 SERINC3Q13530 473 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 ANKRD42Q8N9B4 389 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 ADCY4Q8NFM4 1077 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 GANCQ8TET4 914 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 TMEM245Q9H330 911 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 THG1LQ9NWX6 298 aaKnown RBP8.71□□□□□ -1.01
VPS11-206ENST00000614944 MAT2BQ9NZL9 334 aa8.71□□□□□ -1.01
VPS11-206ENST00000614944 SAE1Q9UBE0 346 aaPredicted RBP8.71□□□□□ -1.01
VPS11-206ENST00000614944 ZFP37Q9Y6Q3 630 aaPredicted RBP8.71□□□□□ -1.01
VPS11-206ENST00000614944 C2orf16Q68DN1 1984 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 SYNJ2BP-COX16A0A087WUM0 186 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 FAM25AB3EWG3 89 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 FAM25CB3EWG5 89 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 FAM25GB3EWG6 89 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 GATCO43716 136 aaKnown RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 NOS1APO75052 506 aaPredicted RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 KLKB1P03952 638 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 MBL2P11226 248 aaPredicted RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 MYOGP15173 224 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 SLC6A4P31645 630 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 ARL4CP56559 192 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 VWA5B1Q5TIE3 1220 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 LPCAT4Q643R3 524 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 FAM109BQ6ICB4 259 aaPredicted RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 CENPUQ71F23 418 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 RHOUQ7L0Q8 258 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 IGFN1Q86VF2 1251 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 JAZF1Q86VZ6 243 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 CMTM8Q8IZV2 173 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 ATPAF2Q8N5M1 289 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 GLIS1Q8NBF1 620 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 GDPD5Q8WTR4 605 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 IGSF8Q969P0 613 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 MARVELD3Q96A59 401 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 ALKBH8Q96BT7 664 aaKnown RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 SLC39A8Q9C0K1 460 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 TMEM168Q9H0V1 697 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 EPB41L4BQ9H329 900 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.02
VPS11-206ENST00000614944 COX16Q9P0S2 106 aa8.71□□□□□ -1.02
VPS11-206ENST00000614944 MEI4A8MW99 385 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RNF103O00237 685 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 KDELR3O43731 214 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 DYRK3O43781 588 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 PRAMEF11O60813 436 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 FAM155BO75949 473 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RHOP08100 348 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 HDCP19113 662 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CCNA2P20248 432 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 SEPHS1P49903 392 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 KCNQ1P51787 676 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RAB14P61106 215 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RACK1P63244 317 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 MYBPC1Q00872 1141 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ILF2Q12905 390 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 CDK10Q15131 360 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 ZNF77Q15935 545 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 MPPE1Q53F39 396 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ZNF425Q6IV72 752 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 KIAA0907Q7Z7F0 614 aaPredicted RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 ZER1Q7Z7L7 766 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CHSY1Q86X52 802 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS11-206ENST00000614944 SNX19Q92543 992 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TMIGD2Q96BF3 282 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ISOC1Q96CN7 298 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 LMLNQ96KR4 655 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 HS6ST2Q96MM7 605 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 NAT9Q9BTE0 207 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CDADC1Q9BWV3 514 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms