RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TMED2Q15363 201 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SEPT7Q16181 437 aaKnown RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 AGAP9Q5VTM2 703 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 IYDQ6PHW0 289 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ABRAXAS1Q6UWZ7 409 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 WASH2PQ6VEQ5 465 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 DENND6AQ8IWF6 608 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 TRIM48Q8IWZ4 208 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 CFAP206Q8IYR0 622 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 NAGSQ8N159 534 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SFRP1Q8N474 314 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ELMO1Q92556 727 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 LPGAT1Q92604 370 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 CDKL2Q92772 493 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 WDR83Q9BRX9 315 aaKnown RBP13.02□□□□□ -0.33
MDC1-209ENST00000613547 P2RY12Q9H244 342 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 WASH6PQ9NQA3 447 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 PRDM8Q9NQV8 689 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 ZFATQ9P243 1243 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 PRSS21Q9Y6M0 314 aa13.02□□□□□ -0.33
MDC1-209ENST00000613547 MYLKQ15746 1914 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 TP53BP1Q12888 1972 aaPredicted RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 A6NCN8 305 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 RHPN2P1A8MT19 583 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 E5RI56 91 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 IFRD1O00458 451 aaPredicted RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 GIPC1O14908 333 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 LIN7AO14910 233 aaPredicted RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 NUDT21O43809 227 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 RFPL3O75679 317 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 TRIM16O95361 564 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 SLU7O95391 586 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 S1PR4O95977 384 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 APOA4P06727 396 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 GLB1P16278 677 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 RPL10P27635 214 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 FMO4P31512 558 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 CARSP49589 748 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 ACADVLP49748 655 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 MAZP56270 477 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 E2F1Q01094 437 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 MGAT5Q09328 741 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 ILF2Q12905 390 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 BOP1Q14137 746 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 CAPN12Q6ZSI9 719 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 EFL1Q7Z2Z2 1120 aaKnown RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 CNTN4Q8IWV2 1026 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 UNC5BQ8IZJ1 945 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 IFI44Q8TCB0 444 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 SLC37A2Q8TED4 501 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 ASZ1Q8WWH4 475 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 TMEM159Q96B96 161 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 ABCG4Q9H172 646 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
MDC1-209ENST00000613547 NSMCE4AQ9NXX6 385 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 LRIT1Q9P2V4 623 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 CRYL1Q9Y2S2 319 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 COMMD10Q9Y6G5 202 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 LRP4O75096 1905 aa13.01□□□□□ -0.33
MDC1-209ENST00000613547 SPTBN4Q9H254 2564 aa13□□□□□ -0.33
MDC1-209ENST00000613547 COL5A1P20908 1838 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 TRBV23OR9-2A0A075B6M9 112 aa13□□□□□ -0.33
MDC1-209ENST00000613547 LY6G6EA0A0G2JKS1 128 aa13□□□□□ -0.33
MDC1-209ENST00000613547 VIPP01282 170 aa13□□□□□ -0.33
MDC1-209ENST00000613547 MYF5P13349 255 aa13□□□□□ -0.33
MDC1-209ENST00000613547 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 PNLIPP16233 465 aa13□□□□□ -0.33
MDC1-209ENST00000613547 XRCC1P18887 633 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 STX2P32856 288 aa13□□□□□ -0.33
MDC1-209ENST00000613547 PHBP35232 272 aa13□□□□□ -0.33
MDC1-209ENST00000613547 LEPRP48357 1165 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 HHEXQ03014 270 aa13□□□□□ -0.33
MDC1-209ENST00000613547 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
MDC1-209ENST00000613547 TRMT10BQ6PF06 316 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 FAM83HQ6ZRV2 1179 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 C3orf62Q6ZUJ4 267 aa13□□□□□ -0.33
MDC1-209ENST00000613547 C17orf82Q86X59 251 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 RBM12BQ8IXT5 1001 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 C2CD4AQ8NCU7 369 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
MDC1-209ENST00000613547 WDR48Q8TAF3 677 aa13□□□□□ -0.33
MDC1-209ENST00000613547 PATE1Q8WXA2 126 aa13□□□□□ -0.33
MDC1-209ENST00000613547 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
MDC1-209ENST00000613547 CXorf40BQ96DE9 158 aa13□□□□□ -0.33
MDC1-209ENST00000613547 C9orf72Q96LT7 481 aa13□□□□□ -0.33
MDC1-209ENST00000613547 LDHAL6BQ9BYZ2 381 aaPredicted RBP13□□□□□ -0.33
MDC1-209ENST00000613547 WWP1Q9H0M0 922 aa13□□□□□ -0.33
MDC1-209ENST00000613547 PLAC1Q9HBJ0 212 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms