RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ZFPM2Q8WW38 1151 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 SLC40A1Q9NP59 571 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 ZNF624Q9P2J8 865 aaPredicted RBP18.84■□□□□ 0.61
SRSF4-206ENST00000605204 PDP2Q9P2J9 529 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 LOXL2Q9Y4K0 774 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 COL27A1Q8IZC6 1860 aaPredicted RBP18.84■□□□□ 0.61
SRSF4-206ENST00000605204 ATMQ13315 3056 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 MGAQ8IWI9 3026 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CFAP46Q8IYW2 2715 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 IGHV5-10-1A0A0J9YXX1 117 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CDRT15L2A8MXV6 281 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CCL22O00626 93 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CASC3O15234 703 aaKnown RBP18.83■□□□□ 0.61
SRSF4-206ENST00000605204 KRT14P02533 472 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 SLC35G4P0C7Q5 338 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 THRAP10827 490 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CSF2RBP32927 897 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 SLC19A1P41440 591 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 PPM1FP49593 454 aaPredicted RBP18.83■□□□□ 0.61
SRSF4-206ENST00000605204 ARSDP51689 593 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 GNG11P61952 73 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 GPS1Q13098 491 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 NFE2L1Q14494 772 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 CCDC38Q502W7 563 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 TTC27Q6P3X3 843 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 KLHL35Q6PF15 583 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 USP53Q70EK8 1073 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 PLXDC1Q8IUK5 500 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 AGBL5Q8NDL9 886 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 PRR11Q96HE9 360 aaPredicted RBP18.83■□□□□ 0.61
SRSF4-206ENST00000605204 SEMA6CQ9H3T2 930 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 FAM96AQ9H5X1 160 aa18.83■□□□□ 0.61
SRSF4-206ENST00000605204 MRM3Q9HC36 420 aaKnown RBP18.83■□□□□ 0.61
SRSF4-206ENST00000605204 SCHIP1Q9P0W5 487 aaPredicted RBP18.83■□□□□ 0.61
SRSF4-206ENST00000605204 RP1P56715 2156 aa18.83■□□□□ 0.6
SRSF4-206ENST00000605204 A0A1W2PNU3 283 aaPredicted RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 CCDC162PA2VCL2 907 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 SGTAO43765 313 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 TNFSF15O95150 251 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 FTH1P02794 183 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 PRB1P04280 392 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 MLNP12872 115 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 NDUFS1P28331 727 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 FOXN2P32314 431 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 EIF2S3P41091 472 aaKnown RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 ABCG1P45844 678 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 DRG2P55039 364 aaKnown RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 RPA4Q13156 261 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 KCNJ11Q14654 390 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 DBN1Q16643 649 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 TMPRSS9Q7Z410 1059 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 PIANPQ8IYJ0 282 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 MPP5Q8N3R9 675 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 OR4L1Q8NH43 312 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 HDAC10Q969S8 669 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 CCDC74BQ96LY2 380 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 RUNDC3BQ96NL0 473 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 XAB2Q9HCS7 855 aaKnown RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 ACSL6Q9UKU0 697 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 HEBP2Q9Y5Z4 205 aa18.82■□□□□ 0.6
SRSF4-206ENST00000605204 ARHGEF17Q96PE2 2063 aaPredicted RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 SETXQ7Z333 2677 aaKnown RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 MN1Q10571 1320 aaPredicted RBP18.82■□□□□ 0.6
SRSF4-206ENST00000605204 OR52A4PA6NMU1 304 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 USP27XA6NNY8 438 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 TOX3O15405 576 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 MTHFD1P11586 935 aaKnown RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 PBLDP30039 288 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 CSTF2P33240 577 aaKnown RBP eCLIP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 SESN2P58004 480 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 PLOD1Q02809 727 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 CLCA4Q14CN2 919 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 RPE65Q16518 533 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 FASTKD1Q53R41 847 aaKnown RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 TMEM164Q5U3C3 297 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 NKAIN2Q5VXU1 208 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 PAPD7Q5XG87 772 aaKnown RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 FAM83HQ6ZRV2 1179 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 ZNF761Q86XN6 746 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 MCUQ8NE86 351 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 OR6P1Q8NGX9 317 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 SLCO2A1Q92959 643 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 TSSK1BQ9BXA7 367 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 KCND1Q9NSA2 647 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 SMARCAL1Q9NZC9 954 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 RNF14Q9UBS8 474 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 ANAPC5Q9UJX4 755 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 WDR37Q9Y2I8 494 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 CTAGE9A4FU28 777 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 NVLO15381 856 aaKnown RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 C1QL1O75973 258 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 UBXN7O94888 489 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 GOT2P00505 430 aaKnown RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 ANKRD34CP0C6C1 535 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 FOXR1Q6PIV2 292 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 ZNF574Q6ZN55 896 aaPredicted RBP18.81■□□□□ 0.6
SRSF4-206ENST00000605204 NCSTNQ92542 709 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 KIFC1Q9BW19 673 aa18.81■□□□□ 0.6
SRSF4-206ENST00000605204 DPH1Q9BZG8 443 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms