RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 PDLIM2Q96JY6 352 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 NAP1L3Q99457 506 aaPredicted RBP27.59■■■□□ 2.01
ZNF558-206ENST00000599938 RALYQ9UKM9 306 aaKnown RBP27.59■■■□□ 2.01
ZNF558-206ENST00000599938 TCAF1Q9Y4C2 921 aa27.59■■■□□ 2.01
ZNF558-206ENST00000599938 CCDC162PA2VCL2 907 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 OR51F1A6NGY5 319 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 CCL4P13236 92 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 TYRP1P17643 537 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 ADRA1DP25100 572 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 DBN1Q16643 649 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 TSTD2Q5T7W7 516 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 PPHLN1Q8NEY8 458 aaKnown RBP27.58■■■□□ 2.01
ZNF558-206ENST00000599938 HM13Q8TCT9 377 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.58■■■□□ 2.01
ZNF558-206ENST00000599938 AP1M1Q9BXS5 423 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 WWP1Q9H0M0 922 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 VPS37BQ9H9H4 285 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 IMP3Q9NV31 184 aaKnown RBP27.58■■■□□ 2.01
ZNF558-206ENST00000599938 PDP2Q9P2J9 529 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 SLC2A6Q9UGQ3 507 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 KLHL3Q9UH77 587 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 ACSL5Q9ULC5 683 aa27.58■■■□□ 2.01
ZNF558-206ENST00000599938 A8MU76 341 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 PGRMC1O00264 195 aaKnown RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 KLK10O43240 276 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 PRAMEF10O60809 474 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 SLC35G4P0C7Q5 338 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 AMD1P17707 334 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 FOXN2P32314 431 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 SESN2P58004 480 aaPredicted RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 TRIP13Q15645 432 aaPredicted RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 KCTD19Q17RG1 926 aaPredicted RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 BROXQ5VW32 411 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 AFTPHQ6ULP2 937 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 FAM129CQ86XR2 697 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 PLXDC1Q8IUK5 500 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 USP7Q93009 1102 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 MAGOHBQ96A72 148 aaKnown RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 DPH1Q9BZG8 443 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 OGFRQ9NZT2 677 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 RIMKLBQ9ULI2 386 aa27.57■■■□□ 2
ZNF558-206ENST00000599938 TTC7AQ9ULT0 858 aaPredicted RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 MN1Q10571 1320 aaPredicted RBP27.57■■■□□ 2
ZNF558-206ENST00000599938 PIKFYVEQ9Y2I7 2098 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 NVLO15381 856 aaKnown RBP27.56■■■□□ 2
ZNF558-206ENST00000599938 MTHFD1P11586 935 aaKnown RBP27.56■■■□□ 2
ZNF558-206ENST00000599938 CAPZBP47756 277 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 VPS41P49754 854 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 TTC27Q6P3X3 843 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 NLRP9Q7RTR0 991 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 PDZD3Q86UT5 571 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 CFAP206Q8IYR0 622 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 LILRA3Q8N6C8 439 aaPredicted RBP27.56■■■□□ 2
ZNF558-206ENST00000599938 HDAC10Q969S8 669 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 ZNF778Q96MU6 729 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 OSBPL9Q96SU4 736 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 SMARCAL1Q9NZC9 954 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.56■■■□□ 2
ZNF558-206ENST00000599938 FOXJ2Q9P0K8 574 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 CFAP20Q9Y6A4 193 aaKnown RBP27.56■■■□□ 2
ZNF558-206ENST00000599938 LOC400499M0QZD8 3231 aa27.56■■■□□ 2
ZNF558-206ENST00000599938 FGF3P11487 239 aaPredicted RBP27.55■■■□□ 2
ZNF558-206ENST00000599938 GFERP55789 205 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 ITIH4Q14624 930 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 TMEM164Q5U3C3 297 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 DUS1LQ6P1R4 473 aaKnown RBP27.55■■■□□ 2
ZNF558-206ENST00000599938 XKR5Q6UX68 686 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 CLDN19Q8N6F1 224 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 COG1Q8WTW3 980 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 RSC1A1Q92681 617 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 C12orf66Q96MD2 445 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 ACSL6Q9UKU0 697 aa27.55■■■□□ 2
ZNF558-206ENST00000599938 C9orf172C9J069 976 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 GOT2P00505 430 aaKnown RBP27.54■■■□□ 2
ZNF558-206ENST00000599938 POLBP06746 335 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 TPSB2P20231 275 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 TERF1P54274 439 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 PRAMEP78395 509 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 ACVR1Q04771 509 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 CLN3Q13286 438 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 PLCL1Q15111 1095 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 TPSAB1Q15661 275 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 SPDYE1Q8NFV5 336 aaPredicted RBP27.54■■■□□ 2
ZNF558-206ENST00000599938 OR6P1Q8NGX9 317 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 PEX13Q92968 403 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 RMDN2Q96LZ7 410 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 TGM7Q96PF1 710 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 INSM2Q96T92 566 aaPredicted RBP27.54■■■□□ 2
ZNF558-206ENST00000599938 COG4Q9H9E3 785 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 WDR70Q9NW82 654 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 SNX12Q9UMY4 172 aa27.54■■■□□ 2
ZNF558-206ENST00000599938 USP27XA6NNY8 438 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 EFCAB7A8K855 629 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 AP3B1O00203 1094 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 AP2A2O94973 939 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 NSG1P42857 185 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 CRADDP78560 199 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 CDK16Q00536 496 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 GPS1Q13098 491 aa27.53■■■□□ 2
ZNF558-206ENST00000599938 PACS1Q6VY07 963 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms