RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ERVK-10P10266 1014 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 ACP1P24666 158 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC1A2P43004 574 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 CD151P48509 253 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 C14orf28Q4W4Y0 310 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 TEDDM1Q5T9Z0 273 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 IYDQ6PHW0 289 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 RBM12BQ8IXT5 1001 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 SFRP1Q8N474 314 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 ASZ1Q8WWH4 475 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 KCNJ9Q92806 393 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 SH3KBP1Q96B97 665 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 BIRC8Q96P09 236 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 OSGEPL1Q9H4B0 414 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 LRRC4CQ9HCJ2 640 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 LATS2Q9NRM7 1088 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 IARS2Q9NSE4 1012 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 TBC1D29Q9UFV1 150 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 NFU1Q9UMS0 254 aa16.26■□□□□ 0.19
SHKBP1-219ENST00000599575 ADAMTS9Q9P2N4 1935 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 TCRBV9S1A1TA0A576 114 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 UBA6A0AVT1 1052 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 EME2A4GXA9 379 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 NOBOXO60393 691 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 PKMP14618 531 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 GLB1P16278 677 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 XRCC1P18887 633 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 CD9P21926 228 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 FASLGP48023 281 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 DAB2P98082 770 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 CTBP1Q13363 440 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 TMED2Q15363 201 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 ZNF658BQ4V348 819 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 LDB1Q86U70 411 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 DENND6AQ8IWF6 608 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC35F3Q8IY50 421 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 LRRN4CLQ8ND94 238 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 WDR48Q8TAF3 677 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 ZFPM2Q8WW38 1151 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 FUT8Q9BYC5 575 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 COG4Q9H9E3 785 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 SARS2Q9NP81 518 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 GULP1Q9UBP9 304 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 DNAJC16Q9Y2G8 782 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 PLEKHM1Q9Y4G2 1056 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 TMEM131Q92545 1883 aa16.25■□□□□ 0.19
SHKBP1-219ENST00000599575 DNAH14Q0VDD8 3507 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 PDZK1P1A8MUH7 402 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 B4DGG1 531 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 APOA4P06727 396 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC35G4P0C7Q5 338 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 NDUFS1P28331 727 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 SSTR1P30872 391 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 SKIV2L2P42285 1042 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 GPR3P46089 330 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 EIF3BP55884 814 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 WDR93Q6P2C0 686 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 TRMT10BQ6PF06 316 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 TRMT10CQ7L0Y3 403 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC9B2Q86UD5 537 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 CFAP206Q8IYR0 622 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 UNC5BQ8IZJ1 945 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 NAGSQ8N159 534 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 DEFB124Q8NES8 71 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 MAPK15Q8TD08 544 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 TMEM159Q96B96 161 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 UCK1Q9HA47 277 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 POT1Q9NUX5 634 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 IL1RAPL1Q9NZN1 696 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 TXNDC16Q9P2K2 825 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 APOBEC2Q9Y235 224 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 HEBP2Q9Y5Z4 205 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 PRSS21Q9Y6M0 314 aa16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 TP53BP1Q12888 1972 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-219ENST00000599575 FAM159BA6NKW6 160 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 IFRD1O00458 451 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 KCNK5O95279 499 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 AHSGP02765 367 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 AOAHP28039 575 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 ATP5DP30049 168 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 FMO4P31512 558 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 NOVA1P51513 510 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 GPX6P59796 221 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 E2F1Q01094 437 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 BIRC2Q13490 618 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 NFE2L1Q14494 772 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 NR1D2Q14995 579 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 CLPPQ16740 277 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 PLA2G4EQ3MJ16 856 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 TTLL9Q3SXZ7 439 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 SYTL3Q4VX76 610 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 PLEKHS1Q5SXH7 462 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 UGT3A1Q6NUS8 523 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 OTOAQ7RTW8 1153 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 ZNF438Q7Z4V0 828 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 ARL14Q8N4G2 192 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms