RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PRAMEF33A0A0G2JMD5 474 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 HEATR9A2RTY3 570 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 CFAP99D6REC4 459 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 TOX3O15405 576 aaPredicted RBP12.78□□□□□ -0.36
USE1-207ENST00000596136 KLK10O43240 276 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 CEP104O60308 925 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 UBXN7O94888 489 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 ZSCAN5DPP0CG00 497 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 ADRA1DP25100 572 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 MPSTP25325 297 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 CXCR5P32302 372 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 MAPK10P53779 464 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 SEPT6Q14141 434 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 GPR18Q14330 331 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
USE1-207ENST00000596136 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 NLRP9Q7RTR0 991 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 DNAAF3Q8N9W5 541 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 DCUN1D1Q96GG9 259 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 PBKQ96KB5 322 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 DDA1Q9BW61 102 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
USE1-207ENST00000596136 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 FOXJ2Q9P0K8 574 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 SEMA5BQ9P283 1151 aa12.78□□□□□ -0.36
USE1-207ENST00000596136 ATMQ13315 3056 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 E7EVH7 732 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 AP2A2O94973 939 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 GAS8O95995 478 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 APRTP07741 180 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 GSTM1P09488 218 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 PRSS56P0CW18 603 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 LIPCP11150 499 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 MTHFD1P11586 935 aaKnown RBP12.77□□□□□ -0.37
USE1-207ENST00000596136 FOXN2P32314 431 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 CAPZBP47756 277 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 KCNJ1P48048 391 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 RAB15P59190 212 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 MC2RQ01718 297 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 GSTM4Q03013 218 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 ITIH4Q14624 930 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 CCDC38Q502W7 563 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 TSTD2Q5T7W7 516 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 GPR150Q8NGU9 434 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 HM13Q8TCT9 377 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 NAT14Q8WUY8 206 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 C9orf72Q96LT7 481 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
USE1-207ENST00000596136 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
USE1-207ENST00000596136 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 KCNF1Q9H3M0 494 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 FBXO8Q9NRD0 319 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 PSMD13Q9UNM6 376 aa12.77□□□□□ -0.37
USE1-207ENST00000596136 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 CCDC162PA2VCL2 907 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 EFCAB7A8K855 629 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 K7ENP7 123 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 CAPN5O15484 640 aaPredicted RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 EFSO43281 561 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 TYRP1P17643 537 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 AMD1P17707 334 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 MSNP26038 577 aaKnown RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 PBLDP30039 288 aaPredicted RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 NSG1P42857 185 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 LMAN1P49257 510 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 GFERP55789 205 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 CDK16Q00536 496 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 VAC14Q08AM6 782 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 DBN1Q16643 649 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 INO80CQ6PI98 192 aaPredicted RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 PACS1Q6VY07 963 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 MICALCLQ6ZW33 695 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 ZFAND4Q86XD8 727 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 CFAP206Q8IYR0 622 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 LILRA3Q8N6C8 439 aaPredicted RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 RSC1A1Q92681 617 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 ART4Q93070 314 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 TEFMQ96QE5 360 aaKnown RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 CCNL2Q96S94 520 aaPredicted RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 ASPSCR1Q9BZE9 553 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 WWP1Q9H0M0 922 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 SIDT1Q9NXL6 827 aaKnown RBP12.76□□□□□ -0.37
USE1-207ENST00000596136 SLC39A1Q9NY26 324 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 SLC2A6Q9UGQ3 507 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 TCAF1Q9Y4C2 921 aa12.76□□□□□ -0.37
USE1-207ENST00000596136 B3GALT1Q9Y5Z6 326 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms