RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 CCM2Q9BSQ5 444 aa18.98■□□□□ 0.63
PNKP-207ENST00000596014 P2RY12Q9H244 342 aa18.98■□□□□ 0.63
PNKP-207ENST00000596014 IARS2Q9NSE4 1012 aaKnown RBP18.98■□□□□ 0.63
PNKP-207ENST00000596014 C17orf113A0A1B0GUU1 675 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 SPAARA0A1B0GVQ0 90 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 A6NCN8 305 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 QSOX1O00391 747 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 S1PR4O95977 384 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 OR56A5P0C7T3 313 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 IDSP22304 550 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 ECHS1P30084 290 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 MAGEA4P43358 317 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 RPIAP49247 311 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 DNAJC3Q13217 504 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 CUL1Q13616 776 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 NFE2L1Q14494 772 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 METRNLQ641Q3 311 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 TRMT10BQ6PF06 316 aaKnown RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 FAM83HQ6ZRV2 1179 aaPredicted RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 C17orf82Q86X59 251 aaPredicted RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 KYQ8NBH2 561 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 GSDMBQ8TAX9 411 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 LPGAT1Q92604 370 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 FAM167BQ9BTA0 163 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 VPS37BQ9H9H4 285 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 PPANQ9NQ55 473 aaKnown RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 PRDM8Q9NQV8 689 aa18.97■□□□□ 0.63
PNKP-207ENST00000596014 INTS10Q9NVR2 710 aaKnown RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 MTRF1LQ9UGC7 380 aaKnown RBP18.97■□□□□ 0.63
PNKP-207ENST00000596014 UBA6A0AVT1 1052 aaPredicted RBP18.96■□□□□ 0.63
PNKP-207ENST00000596014 F3P13726 295 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 RPL10P27635 214 aaKnown RBP18.96■□□□□ 0.63
PNKP-207ENST00000596014 SSTR1P30872 391 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 SLC1A2P43004 574 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 NR0B2Q15466 257 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 LRRC6Q86X45 466 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 CFAP206Q8IYR0 622 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 PATE1Q8WXA2 126 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 C9orf72Q96LT7 481 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 MOCS1Q9NZB8 636 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 FAM8A1Q9UBU6 413 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 FBXO5Q9UKT4 447 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 PADI4Q9UM07 663 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 VPS9D1Q9Y2B5 631 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 CRYL1Q9Y2S2 319 aa18.96■□□□□ 0.63
PNKP-207ENST00000596014 F8W8V4 182 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 FTH1P02794 183 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 GSTM1P09488 218 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 RPS3P23396 243 aaKnown RBP eCLIP18.95■□□□□ 0.62
PNKP-207ENST00000596014 ACP1P24666 158 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 DUSP3P51452 185 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 ADARP55265 1226 aaKnown RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 SIM1P81133 766 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 GSTM4Q03013 218 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 SEPT7Q16181 437 aaKnown RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 ZNF658BQ4V348 819 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 C14orf28Q4W4Y0 310 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 ZNF789Q5FWF6 425 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 IYDQ6PHW0 289 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 ABRAXAS1Q6UWZ7 409 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 XKR5Q6UX68 686 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 WASH2PQ6VEQ5 465 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 CNTN4Q8IWV2 1026 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 GABPB2Q8TAK5 448 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 BIRC8Q96P09 236 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 TSPYL1Q9H0U9 437 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 ACBD3Q9H3P7 528 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 WASH6PQ9NQA3 447 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 TOR4AQ9NXH8 423 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 TRBV23OR9-2A0A075B6M9 112 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 CPED1A4D0V7 1026 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 EME2A4GXA9 379 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 PDZK1P1A8MUH7 402 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 F7P08709 466 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 EIF3BP55884 814 aaKnown RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 TEDDM1Q5T9Z0 273 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 AGAP9Q5VTM2 703 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 CAPN12Q6ZSI9 719 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 SFRP1Q8N474 314 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 ARL14Q8N4G2 192 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 LILRA3Q8N6C8 439 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 C2CD4AQ8NCU7 369 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 HM13Q8TCT9 377 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 FMO2Q99518 471 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 VIPAS39Q9H9C1 493 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 FBXO6Q9NRD1 293 aaPredicted RBP18.95■□□□□ 0.62
PNKP-207ENST00000596014 EVA1BQ9NVM1 165 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 GNPTGQ9UJJ9 305 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 ACSL5Q9ULC5 683 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 NFU1Q9UMS0 254 aa18.95■□□□□ 0.62
PNKP-207ENST00000596014 IQCF5A8MTL0 148 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 BRAFP15056 766 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 OAS2P29728 719 aaKnown RBP18.94■□□□□ 0.62
PNKP-207ENST00000596014 FMO4P31512 558 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 LEPRP48357 1165 aaKnown RBP18.94■□□□□ 0.62
PNKP-207ENST00000596014 ACADVLP49748 655 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 GPX6P59796 221 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 MPP1Q00013 466 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 CTSL3PQ5NE16 218 aa18.94■□□□□ 0.62
PNKP-207ENST00000596014 PTRHD1Q6GMV3 140 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms