RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PCGF5Q86SE9 256 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 LDB1Q86U70 411 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 SLITRK4Q8IW52 837 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TRIM48Q8IWZ4 208 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CFAP206Q8IYR0 622 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 ZCCHC14Q8WYQ9 949 aaKnown RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 SIGLEC10Q96LC7 697 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TMEM74Q96NL1 305 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 KRT12Q99456 494 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TTC1Q99614 292 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TRIM56Q9BRZ2 755 aaKnown RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 TRIM51Q9BSJ1 452 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 WWP1Q9H0M0 922 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 CCDC86Q9H6F5 360 aaKnown RBP21.47■■□□□ 1.03
HOMER3-206ENST00000594439 RDH14Q9HBH5 336 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 POT1Q9NUX5 634 aa21.47■■□□□ 1.03
HOMER3-206ENST00000594439 FAM237BA0A1B0GVD1 139 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 LILRA5A6NI73 299 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 VAPBO95292 243 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 CSF2RBP32927 897 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 EPHA4P54764 986 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 DHX34Q14147 1143 aaKnown RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 AARS2Q5JTZ9 985 aaKnown RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 KIAA0930Q6ICG6 404 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 CASC4Q6P4E1 433 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 ZNF574Q6ZN55 896 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 PIM3Q86V86 326 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 HOOK3Q86VS8 718 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 CXorf40BQ96DE9 158 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 LIN37Q96GY3 246 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 C16orf45Q96MC5 204 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-206ENST00000594439 TBC1D10AQ9BXI6 508 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 SEMA6CQ9H3T2 930 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 COG4Q9H9E3 785 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 VPS37BQ9H9H4 285 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 SLC40A1Q9NP59 571 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 SAMD15Q9P1V8 674 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 ANAPC5Q9UJX4 755 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 FRYQ5TBA9 3013 aa21.46■■□□□ 1.03
HOMER3-206ENST00000594439 MAGEB16A2A368 324 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 TMX2-CTNND1H3BSU7 103 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 QSOX1O00391 747 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 POLBP06746 335 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 GSTM1P09488 218 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 HOXB3P14651 431 aaPredicted RBP21.45■■□□□ 1.02
HOMER3-206ENST00000594439 ARCN1P48444 511 aaKnown RBP21.45■■□□□ 1.02
HOMER3-206ENST00000594439 LSSP48449 732 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 GSTM4Q03013 218 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 ANKRD20A4Q4UJ75 823 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 SPATA4Q8NEY3 305 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 GPR150Q8NGU9 434 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 OR10G6Q8NH81 332 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 RMDN2Q96LZ7 410 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 FCRL3Q96P31 734 aaPredicted RBP21.45■■□□□ 1.02
HOMER3-206ENST00000594439 INSM2Q96T92 566 aaPredicted RBP21.45■■□□□ 1.02
HOMER3-206ENST00000594439 POLR1BQ9H9Y6 1135 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 EPB41L5Q9HCM4 733 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 AK5Q9Y6K8 562 aa21.45■■□□□ 1.02
HOMER3-206ENST00000594439 CCDC187A0A096LP49 1063 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 DUX1O43812 170 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 MPOP05164 745 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 MTHFD1P11586 935 aaKnown RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 PPARGP37231 505 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 TTPAP49638 278 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 GABREP78334 506 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 CAPRIN2Q6IMN6 1127 aaKnown RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 TMEM135Q86UB9 458 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 RBM12BQ8IXT5 1001 aaKnown RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 SPDYE1Q8NFV5 336 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 ZNF669Q96BR6 464 aaPredicted RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 AHCYL2Q96HN2 611 aaKnown RBP21.44■■□□□ 1.02
HOMER3-206ENST00000594439 DPYSL5Q9BPU6 564 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 STRADBQ9C0K7 418 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 SATB2Q9UPW6 733 aa21.44■■□□□ 1.02
HOMER3-206ENST00000594439 IGHV5-10-1A0A0J9YXX1 117 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 PMS2P1A4D2B8 440 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 TAF4O00268 1085 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 BRINP1O60477 761 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 FTH1P02794 183 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 SLC35G4P0C7Q5 338 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 OR56A5P0C7T3 313 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 LIMK2P53671 638 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 C2orf54Q08AI8 447 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 GPR18Q14330 331 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 MORF4L2Q15014 288 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 C3orf38Q5JPI3 329 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 OR4D9Q8NGE8 314 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 WDR36Q8NI36 951 aaKnown RBP21.43■■□□□ 1.02
HOMER3-206ENST00000594439 PRR11Q96HE9 360 aaPredicted RBP21.43■■□□□ 1.02
HOMER3-206ENST00000594439 C12orf66Q96MD2 445 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 OR52A5Q9H2C5 316 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 EPB41L1Q9H4G0 881 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 IMP3Q9NV31 184 aaKnown RBP21.43■■□□□ 1.02
HOMER3-206ENST00000594439 OGFRQ9NZT2 677 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 TMEM9Q9P0T7 183 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 CFAP20Q9Y6A4 193 aaKnown RBP21.43■■□□□ 1.02
HOMER3-206ENST00000594439 RPS6KL1Q9Y6S9 549 aa21.43■■□□□ 1.02
HOMER3-206ENST00000594439 ZCWPW2A0A1B0GU75 182 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 GOLGA8KD6RF30 607 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms