RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 BAIAP3O94812 1187 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 CNPP09543 421 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 BMP2P12643 396 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 ITGB6P18564 788 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 UGT1A6P19224 532 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 ATP6V1B2P21281 511 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 UGT1A1P22309 533 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 UGT1A4P22310 534 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 PSMA4P25789 261 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 UGT1A3P35503 534 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 UGT1A5P35504 534 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 MNX1P50219 401 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 CAPRIN1Q14444 709 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 SMU1Q2TAY7 513 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 MYLK3Q32MK0 819 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 DGKKQ5KSL6 1271 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 GPRC6AQ5T6X5 926 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 ZDHHC20Q5W0Z9 365 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 Q6ZSR9 355 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 USP45Q70EL2 814 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 OR4F6Q8NGB9 312 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 TMEM125Q96AQ2 219 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 ASIC4Q96FT7 647 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 ZNF597Q96LX8 424 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 C17orf80Q9BSJ5 609 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 SEMA6AQ9H2E6 1030 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 COQ10BQ9H8M1 238 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 RDH14Q9HBH5 336 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 PPIL1Q9Y3C6 166 aa18.87■□□□□ 0.61
PRKCSH-209ENST00000589838 A0A1W2PQ67 120 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 DHRS12A0PJE2 317 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 C9JVG2 144 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 ZNF821O75541 412 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 FAM58BPP0C7Q3 252 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 SRCP12931 536 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 GKP32189 559 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 NSG1P42857 185 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 TTC23LQ6PF05 361 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 RNF165Q6ZSG1 346 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 ERMP1Q7Z2K6 904 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 UBTD2Q8WUN7 234 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CANT1Q8WVQ1 401 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 SCRN2Q96FV2 425 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CNBD2Q96M20 576 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CDK15Q96Q40 435 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 C1orf50Q9BV19 199 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CD244Q9BZW8 370 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 KCTD5Q9NXV2 234 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 OPTCQ9UBM4 332 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 PRSS21Q9Y6M0 314 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 AGAP14A8MT82 685 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 GRM6O15303 877 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 AKAP10O43572 662 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 AHCYL1O43865 530 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 FGF18O76093 207 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 GPIP06744 558 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 FESP07332 822 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 ZFP36L2P47974 494 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 MAD2L1Q13257 205 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 NR6A1Q15406 480 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 TBCELQ5QJ74 424 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 FOXB2Q5VYV0 432 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CRTC1Q6UUV9 634 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 ZFAND4Q86XD8 727 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 GALNT13Q8IUC8 556 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 SFRP1Q8N474 314 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 VPS33AQ96AX1 596 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 KCTD14Q9BQ13 255 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CPEB1Q9BZB8 566 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 SUV39H2Q9H5I1 410 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 ZDHHC3Q9NYG2 299 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 WWOXQ9NZC7 414 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 TSR3Q9UJK0 312 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 SLC25A13Q9UJS0 675 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 INTS6Q9UL03 887 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 CLEC4EQ9ULY5 219 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 HS3ST2Q9Y278 367 aa18.86■□□□□ 0.61
PRKCSH-209ENST00000589838 EIF3FO00303 357 aaPredicted RBP18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 SLC28A1O00337 649 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 RGS14O43566 566 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 WDR47O94967 919 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 CSPG5O95196 566 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ADH1AP07327 375 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 UMPSP11172 480 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 FCGR1AP12314 374 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 PSMC3P17980 439 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 PIK3CGP48736 1102 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 HSPA7P48741 367 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 CDKL4Q5MAI5 379 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 C6orf52Q5T4I8 152 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 LILRA6Q6PI73 481 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 PTRH1Q86Y79 214 aaKnown RBP18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 SPPL2CQ8IUH8 684 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 DPP10Q8N608 796 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 CLDN19Q8N6F1 224 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 PACRGLQ8N7B6 248 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 DNAJB14Q8TBM8 379 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms