RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ULK4Q96C45 1275 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 LRRC45Q96CN5 670 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 GRAMD1AQ96CP6 724 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 PBKQ96KB5 322 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 ZNF578Q96N58 590 aaPredicted RBP9.67□□□□□ -0.86
PTPN2-208ENST00000589216 RANBP9Q96S59 729 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 STRADBQ9C0K7 418 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 SLC40A1Q9NP59 571 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 WASH6PQ9NQA3 447 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 THSD1Q9NS62 852 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 POT1Q9NUX5 634 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 IMP3Q9NV31 184 aaKnown RBP9.67□□□□□ -0.86
PTPN2-208ENST00000589216 MARCH4Q9P2E8 410 aaPredicted RBP9.67□□□□□ -0.86
PTPN2-208ENST00000589216 KLHL3Q9UH77 587 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 CFAP46Q8IYW2 2715 aa9.67□□□□□ -0.86
PTPN2-208ENST00000589216 MGAT4DA6NG13 374 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 OR5K4A6NMS3 321 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 A8MU76 341 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 C9orf172C9J069 976 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 OR1I1O60431 355 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 PHF2O75151 1096 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 AVILO75366 819 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 KRT14P02533 472 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 ATP1B2P14415 290 aaPredicted RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 VCLP18206 1134 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 TPSB2P20231 275 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 MGAT1P26572 445 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 ARNTP27540 789 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 NMBRP28336 390 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 SLC5A2P31639 672 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 COILP38432 576 aaPredicted RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 CAPZBP47756 277 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 PREPP48147 710 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 MAPK10P53779 464 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 ERVPABLB-1P60509 514 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 TLE3Q04726 772 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 GPS1Q13098 491 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 SRSF6Q13247 344 aaKnown RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 SQSTM1Q13501 440 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 TPSAB1Q15661 275 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 RPE65Q16518 533 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 SNAP47Q5SQN1 464 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 METRNLQ641Q3 311 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 AFTPHQ6ULP2 937 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 CES3Q6UWW8 571 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 NAPRTQ6XQN6 538 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 LDB1Q86U70 411 aaPredicted RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 JAMLQ86YT9 394 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 AGGF1Q8N302 714 aaeCLIP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 MPP5Q8N3R9 675 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 PPHLN1Q8NEY8 458 aaKnown RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 HM13Q8TCT9 377 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 LKAAEAR1Q8TD35 194 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 ACTRT1Q8TDG2 376 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 CPT1BQ92523 772 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 NCSTNQ92542 709 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 HDAC10Q969S8 669 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 MAGOHBQ96A72 148 aaKnown RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 CXorf40BQ96DE9 158 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 RNF31Q96EP0 1072 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 DCUN1D1Q96GG9 259 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 LINC00615Q96LM1 132 aaPredicted RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 INSM2Q96T92 566 aaPredicted RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 STN1Q9H668 368 aaKnown RBP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 COG4Q9H9E3 785 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 UCK1Q9HA47 277 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 CHRAC1Q9NRG0 131 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 TREX1Q9NSU2 369 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 OCIAD1Q9NX40 245 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 LHX6Q9UPM6 363 aa9.66□□□□□ -0.86
PTPN2-208ENST00000589216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPN2-208ENST00000589216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 HGSO14964 777 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 KIF1CO43896 1103 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 UBXN7O94888 489 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 VIPP01282 170 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 POLBP06746 335 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 F7P08709 466 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 JMJD7P0C870 316 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 FGF3P11487 239 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 ADRA1DP25100 572 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 RBMS1P29558 406 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 PDHA2P29803 388 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 HALP42357 657 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 MAGEA6P43360 314 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 ABCG1P45844 678 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 PPM1FP49593 454 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 GNG11P61952 73 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 EIF3IQ13347 325 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 TGIF1Q15583 401 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 CLPPQ16740 277 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 SKIDA1Q1XH10 827 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 TMEM71Q6P5X7 295 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 CCDC137Q6PK04 289 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 WDR74Q6RFH5 385 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 PACS1Q6VY07 963 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 CAND1Q86VP6 1230 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 ZFAND4Q86XD8 727 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms