RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-208	ENST00000589165	TBC1D10A	Q9BXI6	508 aa		13.59	□□□□□ -0.23
ERCC1-208	ENST00000589165	SSUH2	Q9Y2M2	353 aa		13.59	□□□□□ -0.23
ERCC1-208	ENST00000589165	MN1	Q10571	1320 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	CCDC162P	A2VCL2	907 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	PGRMC1	O00264	195 aa	Known RBP	13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	AP2A2	O94973	939 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	GSTM1	P09488	218 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	ITIH1	P19827	911 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	TPSB2	P20231	275 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	ITPKB	P27987	946 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	SLC5A2	P31639	672 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	BASP1	P80723	227 aa	Known RBP	13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	GSTM4	Q03013	218 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	GPR18	Q14330	331 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	ITIH4	Q14624	930 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	TPSAB1	Q15661	275 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	DBN1	Q16643	649 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	COL28A1	Q2UY09	1125 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	PACS1	Q6VY07	963 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	ARHGAP22	Q7Z5H3	698 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	PLXDC1	Q8IUK5	500 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	HM13	Q8TCT9	377 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	COG1	Q8WTW3	980 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	NAT14	Q8WUY8	206 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	KCNE4	Q8WWG9	221 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	OSBPL9	Q96SU4	736 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	VPS37B	Q9H9H4	285 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	TRMT1	Q9NXH9	659 aa	Known RBP	13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	OGFR	Q9NZT2	677 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	SNX12	Q9UMY4	172 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	LHX6	Q9UPM6	363 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	TCAF1	Q9Y4C2	921 aa		13.58	□□□□□ -0.24
ERCC1-208	ENST00000589165	PTPRQ	Q9UMZ3	2332 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	CCDC78	A2IDD5	438 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	UBXN7	O94888	489 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	C9	P02748	559 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PRSS56	P0CW18	603 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	FGF3	P11487	239 aa	Predicted RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	MTHFD1	P11586	935 aa	Known RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	MPST	P25325	297 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PBLD	P30039	288 aa	Predicted RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	FOXN2	P32314	431 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	CSTF2	P33240	577 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ETV5	P41161	510 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	NSG1	P42857	185 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	MAGEA6	P43360	314 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	NPY2R	P49146	381 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ZNF658B	Q4V348	819 aa	Predicted RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PCID2	Q5JVF3	399 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	TMEM164	Q5U3C3	297 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	LYPLAL1	Q5VWZ2	237 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ARMC3	Q5W041	872 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	TTC27	Q6P3X3	843 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	AFTPH	Q6ULP2	937 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	CERS6	Q6ZMG9	384 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PPHLN1	Q8NEY8	458 aa	Known RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ZFPM2	Q8WW38	1151 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	HDAC10	Q969S8	669 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	MAGOHB	Q96A72	148 aa	Known RBP	13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ZNF778	Q96MU6	729 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	CCM2	Q9BSQ5	444 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	AP1M1	Q9BXS5	423 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	IL22	Q9GZX6	179 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	ZMYND15	Q9H091	742 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	SLC2A6	Q9UGQ3	507 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PSMD13	Q9UNM6	376 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PCDHGA3	Q9Y5H0	932 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	KIF26B	Q2KJY2	2108 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	IGSF10	Q6WRI0	2623 aa		13.57	□□□□□ -0.24
ERCC1-208	ENST00000589165	PRAMEF33	A0A0G2JMD5	474 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	OR51F1	A6NGY5	319 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	USP27X	A6NNY8	438 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165		B4E171	279 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	C9orf172	C9J069	976 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	QSOX1	O00391	747 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	TOX3	O15405	576 aa	Predicted RBP	13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	ANKRD34C	P0C6C1	535 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	CCL4	P13236	92 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	AMD1	P17707	334 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	COIL	P38432	576 aa	Predicted RBP	13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	TSPAN7	P41732	249 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	MAPK9	P45984	424 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	CAPZB	P47756	277 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	PPM1F	P49593	454 aa	Predicted RBP	13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	UCN	P55089	124 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	LRRC8B	Q6P9F7	803 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	JAML	Q86YT9	394 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	CFAP206	Q8IYR0	622 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	CLDN19	Q8N6F1	224 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	OR4L1	Q8NH43	312 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	USP7	Q93009	1102 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	TAAR9	Q96RI9	348 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	INSM2	Q96T92	566 aa	Predicted RBP	13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	RAB33B	Q9H082	229 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	WWP1	Q9H0M0	922 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	SMARCAL1	Q9NZC9	954 aa		13.56	□□□□□ -0.24
ERCC1-208	ENST00000589165	BFAR	Q9NZS9	450 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms