RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 CLOCKO15516 846 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 RETP07949 1114 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 RPS3P23396 243 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■■■■□ 22
KDM4B-208ENST00000589104 HMOX2P30519 316 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 PLK1P53350 603 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 ATXN3P54252 364 aaPredicted RBP13.24□□□□□ -0.29
KDM4B-208ENST00000589104 TUSC3Q13454 348 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 DAG1Q14118 895 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 TAF1AQ15573 450 aaPredicted RBP13.24□□□□□ -0.29
KDM4B-208ENST00000589104 ZNF551Q7Z340 670 aaPredicted RBP13.24□□□□□ -0.29
KDM4B-208ENST00000589104 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 TRIB2Q92519 343 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 USP7Q93009 1102 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
KDM4B-208ENST00000589104 ATP6AP2A0A1C7CYW4 349 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 ATP6AP2O75787 350 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 MLYCDO95822 493 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 RAP2AP10114 183 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 EEF1DP29692 281 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 POLR2JP52435 117 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 IL18R1Q13478 541 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 NIPAL1Q6NVV3 410 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 LDB1Q86U70 411 aaPredicted RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 AADATQ8N5Z0 425 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 OR4L1Q8NH43 312 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 KCNJ9Q92806 393 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 EID2BQ96D98 161 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 PSKH2Q96QS6 385 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 MID1IP1Q9NPA3 183 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 FAM118AQ9NWS6 357 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 UXTQ9UBK9 157 aaPredicted RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 KCNE1BA0A087WTH5 132 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 A0A1W2PPW3 197 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 FAM149AA5PLN7 773 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 F8W810 466 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 TAPBPO15533 448 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 GLUD1P00367 558 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 HGFP14210 728 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 EPORP19235 508 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 TGM1P22735 817 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 PWP1Q13610 501 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 TMEM179BQ7Z7N9 219 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 FAM86B1Q8N7N1 296 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 STAG3L4Q8TBR4 150 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 GTF2H4Q92759 462 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 C11orf24Q96F05 449 aaPredicted RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 REXO5Q96IC2 774 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 COX4I2Q96KJ9 171 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 CLMPQ9H6B4 373 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 FAM32AQ9Y421 112 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 HTTP42858 3142 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 SLC22A3O75751 556 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 HOXB6P17509 224 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 PIGAP37287 484 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 IFITM3Q01628 133 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 LPPQ93052 612 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 IKZF5Q9H5V7 419 aa13.23□□□□□ -0.29
KDM4B-208ENST00000589104 AGO1Q9UL18 857 aaKnown RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 GPC6Q9Y625 555 aaPredicted RBP13.23□□□□□ -0.29
KDM4B-208ENST00000589104 PRSS56P0CW18 603 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 PLA2G16P53816 162 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 ARPC4P59998 168 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 PCDH1Q08174 1060 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
KDM4B-208ENST00000589104 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 TRIML2Q8N7C3 387 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 OR13C4Q8NGS5 318 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 LINC01599Q8WXQ3 324 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 ZNF300Q96RE9 604 aaPredicted RBP13.22□□□□□ -0.29
KDM4B-208ENST00000589104 ATXN3LQ9H3M9 355 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 TPK1Q9H3S4 243 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 DUSP21Q9H596 190 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 CATSPERZQ9NTU4 200 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 DENND4AQ7Z401 1863 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 SAC3D1A6NKF1 404 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 A8MU76 341 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 FKBP1BP68106 108 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 POP5Q969H6 163 aaKnown RBP13.22□□□□□ -0.29
KDM4B-208ENST00000589104 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 CHID1Q9BWS9 393 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 S100BP04271 92 aaPredicted RBP13.22□□□□□ -0.29
KDM4B-208ENST00000589104 IDUAP35475 653 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 BRCC3P46736 316 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 CDH13P55290 713 aa13.22□□□□□ -0.29
KDM4B-208ENST00000589104 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
KDM4B-208ENST00000589104 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms