RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 GRHL2Q6ISB3 625 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 GJB7Q6PEY0 223 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 B4GALNT4Q76KP1 1039 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 ARID3BQ8IVW6 561 aaPredicted RBP7.82□□□□□ -1.16
ATG4D-210ENST00000588972 FAM114A1Q8IWE2 563 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 SCN4BQ8IWT1 228 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 LMO3Q8TAP4 145 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 C2orf15Q8WU43 125 aaKnown RBP7.82□□□□□ -1.16
ATG4D-210ENST00000588972 NPIPB3Q92617 1050 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 TCEAL3Q969E4 200 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 APOPT1Q96IL0 206 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 ZFYVE19Q96K21 471 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 NUDT16L1Q9BRJ7 211 aaKnown RBP7.82□□□□□ -1.16
ATG4D-210ENST00000588972 FUZQ9BT04 418 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 MED10Q9BTT4 135 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 FUCA2Q9BTY2 467 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 TPSD1Q9BZJ3 242 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 ELOVL4Q9GZR5 314 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 HSD3B7Q9H2F3 369 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 CYP3A43Q9HB55 503 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 CISHQ9NSE2 258 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 FAM49BQ9NUQ9 324 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 NSMCE4AQ9NXX6 385 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 TAB2Q9NYJ8 693 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 SLC8A2Q9UPR5 921 aa7.82□□□□□ -1.16
ATG4D-210ENST00000588972 ZNF638Q14966 1978 aaKnown RBP7.82□□□□□ -1.16
ATG4D-210ENST00000588972 FLNBO75369 2602 aaKnown RBP7.82□□□□□ -1.16
ATG4D-210ENST00000588972 LNP1A1A4G5 178 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 AGAP5A6NIR3 686 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 MBD3L5A6NJ08 208 aaPredicted RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PES1O00541 588 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PEX12O00623 359 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 P4HA2O15460 535 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 GPR42O15529 346 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PRAMEF12O95522 483 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 F9P00740 461 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 CALCAP01258 141 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 ADORA2BP29275 332 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 GGT5P36269 586 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 TUFMP49411 452 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 VAV2P52735 878 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 RAD23BP54727 409 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 RPP30P78346 268 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 SMARCB1Q12824 385 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 KRT31Q15323 416 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 ITPRIPL2Q3MIP1 535 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 ZSCAN23Q3MJ62 389 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PLK5Q496M5 336 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 LIPMQ5VYY2 423 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 Q6ZSN1 163 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PAQR9Q6ZVX9 377 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 DNAJB7Q7Z6W7 309 aaPredicted RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 CAND1Q86VP6 1230 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 DHX40Q8IX18 779 aaKnown RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PTGR2Q8N8N7 351 aaPredicted RBP7.81□□□□□ -1.16
ATG4D-210ENST00000588972 SLC4A11Q8NBS3 891 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 SLC2A14Q8TDB8 520 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 PSMG2Q969U7 264 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 JAKMIP2Q96AA8 810 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 WDYHV1Q96HA8 205 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 BOD1Q96IK1 185 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 LRRC3BQ96PB8 259 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 TUBGCP2Q9BSJ2 902 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 GALNT9Q9HCQ5 603 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 TMEM74BQ9NUR3 256 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 RAB21Q9UL25 225 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 TTLL3Q9Y4R7 772 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 ASB3Q9Y575 518 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 CACNA1EQ15878 2313 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 ANAPC1Q9H1A4 1944 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 IGSF10Q6WRI0 2623 aa7.81□□□□□ -1.16
ATG4D-210ENST00000588972 HELZP42694 1942 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 NUP205Q92621 2012 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 C4orf47A7E2U8 309 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 F8VP50 259 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 NKX2-8O15522 239 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 HNRNPRO43390 633 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 BEST1O76090 585 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 RHOBTB1O94844 696 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CAVIN2O95810 425 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CHN1P15882 459 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 PPP3CBP16298 524 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 HMGA1P17096 107 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 ACO1P21399 889 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 RRM1P23921 792 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 PON1P27169 355 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 GABRR2P28476 465 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 MAGEA11P43364 429 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 DGKQP52824 942 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CREB5Q02930 508 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CETN1Q12798 172 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 VEPH1Q14D04 833 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CCNG2Q16589 344 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 EXOC3L4Q17RC7 722 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms