RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CA14Q9ULX7 337 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 NCKAP1Q9Y2A7 1128 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 NCF1BA6NI72 391 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 NCF1CA8MVU1 366 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 RAD51BO15315 384 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 VEGFDO43915 354 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SNX2O60749 519 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 DCTN3O75935 186 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 CDK14O94921 469 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 S100BP04271 92 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 RPS17P08708 135 aaKnown RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 MPC1LP0DKB6 136 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 CHRNB1P11230 501 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ACADMP11310 421 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 NCF1P14598 390 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ALDH18A1P54886 795 aaKnown RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 NAA20P61599 178 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ZP2Q05996 745 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 HSPA14Q0VDF9 509 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 GALNT1Q10472 559 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SP140Q13342 867 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 LRRC32Q14392 662 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 IRF4Q15306 451 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TGFBIQ15582 683 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SYTL3Q4VX76 610 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 UNC50Q53HI1 259 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM220Q6QAJ8 160 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 CYHR1Q6ZMK1 362 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 Q6ZS52 159 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 NEK10Q6ZWH5 1172 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TRPM8Q7Z2W7 1104 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 HEATR4Q86WZ0 1026 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 HORMAD1Q86X24 394 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ADHFE1Q8IWW8 467 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF687Q8N1G0 1237 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SYNPOQ8N3V7 929 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TP53I13Q8NBR0 393 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 GLMNQ92990 594 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 HIC2Q96JB3 615 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF514Q96K75 400 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 OSBPL6Q9BZF3 934 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ILKAPQ9H0C8 392 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 OR2AG1Q9H205 316 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 STN1Q9H668 368 aaKnown RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 EML4Q9HC35 981 aaKnown RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TRIM39Q9HCM9 518 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ABCF3Q9NUQ8 709 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 CD274Q9NZQ7 290 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 ADAMTS6Q9UKP5 1117 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 CDYLQ9Y232 598 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-205ENST00000588745 OARD1Q9Y530 152 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 TRPM6Q9BX84 2022 aa11.21□□□□□ -0.61
SMAD4-205ENST00000588745 PRR23AA6NEV1 266 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 TMEM202A6NGA9 273 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CHURC1-FNTBB4DL54 471 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 FFAR2O15552 330 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 LILRB5O75023 590 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 GPC4O75487 556 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 SUPT7LO94864 414 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 SIX3O95343 332 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 ENO2P09104 434 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 GSTM1P09488 218 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 GABRG2P18507 467 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 TARSP26639 723 aaKnown RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 EEF1DP29692 281 aaKnown RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 RPL14P50914 215 aaKnown RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 PPP2CBP62714 309 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 PPP2CAP67775 309 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CDK3Q00526 305 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 GSTM4Q03013 218 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 FGL2Q14314 439 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 NEK5Q6P3R8 708 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 MAVSQ7Z434 540 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CUZD1Q86UP6 607 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 TRAPPC5Q8IUR0 188 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 PDPRQ8NCN5 879 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 AGR3Q8TD06 166 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 ASZ1Q8WWH4 475 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CCT6BQ92526 530 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 LENG8Q96PV6 779 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 ASB2Q96Q27 587 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 CCM2Q9BSQ5 444 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 C1QTNF7Q9BXJ2 289 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 TEX101Q9BY14 249 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 WDR26Q9H7D7 661 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 RDH14Q9HBH5 336 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 POLMQ9NP87 494 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-205ENST00000588745 PRDM6Q9NQX0 595 aa11.2□□□□□ -0.62
SMAD4-205ENST00000588745 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms