RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LRRC38Q5VT99 294 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 METRNLQ641Q3 311 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 DUS1LQ6P1R4 473 aaKnown RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 FAM151BQ6UXP7 276 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 CPT1CQ8TCG5 803 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 ZNF501Q96CX3 271 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 OXNAD1Q96HP4 312 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 MRGPRX2Q96LB1 330 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A7Q9HAW7 530 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A10Q9HAW8 530 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 UGT1A8Q9HAW9 530 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 SAE1Q9UBE0 346 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-204ENST00000588687 FER1L5A0AVI2 2057 aa17.99■□□□□ 0.47
CCDC43-204ENST00000588687 OR2AG2A6NM03 316 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 EPOP01588 193 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 ZFXP17010 805 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 NFKB1P19838 968 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 DYNLT1P63172 113 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 TUBB4BP68371 445 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 HSD11B2P80365 405 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 TUBB2AQ13885 445 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 GPR19Q15760 415 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 DNTTIP2Q5QJE6 756 aaKnown RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 LDLRAP1Q5SW96 308 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 IZUMO3Q5VZ72 239 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 LCN10Q6JVE6 187 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 KLHL35Q6PF15 583 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 MFSD7Q6UXD7 560 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 GDAP1Q8TB36 358 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 SLC35G2Q8TBE7 412 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 PPM1MQ96MI6 270 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 DNAJC7Q99615 494 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 TUBB2BQ9BVA1 445 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 ZCCHC2Q9C0B9 1178 aaKnown RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 LATS2Q9NRM7 1088 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 IMP3Q9NV31 184 aaKnown RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 PLEKHB1Q9UF11 243 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 FAM153AQ9UHL3 310 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 BTRCQ9Y297 605 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 MAP4K5Q9Y4K4 846 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 CFAP20Q9Y6A4 193 aaKnown RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 DNMT3AQ9Y6K1 912 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-204ENST00000588687 ESPL1Q14674 2120 aa17.98■□□□□ 0.47
CCDC43-204ENST00000588687 GLYATL1P3A0A0U1RQE8 302 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 SGTAO43765 313 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 SCRG1O75711 98 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 LPOP22079 712 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 CDKN2BP42772 138 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 PTGIRP43119 386 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 PGDP52209 483 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 KPNA2P52292 529 aaKnown RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 ADCY2Q08462 1091 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 ABRQ12979 859 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 PLCL1Q15111 1095 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 C4orf17Q53FE4 359 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 PRR30Q53SZ7 412 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 ZNF789Q5FWF6 425 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 ZDHHC20Q5W0Z9 365 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 TMEM220Q6QAJ8 160 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 RFX6Q8HWS3 928 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 BEND7Q8N7W2 519 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 Q8NA96 180 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 SPDYE1Q8NFV5 336 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 NAT14Q8WUY8 206 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 LRFN5Q96NI6 719 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 INSM2Q96T92 566 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-204ENST00000588687 SLC25A23Q9BV35 468 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 ING2Q9H160 280 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 LRRC4CQ9HCJ2 640 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 SLC24A2Q9UI40 661 aa17.97■□□□□ 0.47
CCDC43-204ENST00000588687 CSMD1Q96PZ7 3565 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 SSU72P8A0A1W2PR75 194 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 ARGFXA6NJG6 315 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 TTLL8A6PVC2 850 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 BUD23O43709 281 aaKnown RBP17.96■□□□□ 0.47
CCDC43-204ENST00000588687 SEMA7AO75326 666 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 VPS4BO75351 444 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 CAPN1P07384 714 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 RORAP35398 523 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 ARHGAP25P42331 645 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 SLC1A5Q15758 541 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 PRAMEF17Q5VTA0 474 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 FAM198BQ6UWH4 519 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 GLT6D1Q7Z4J2 308 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 RHOT1Q8IXI2 618 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 CARFQ8N187 725 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 TTC25Q96NG3 672 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 GORASP1Q9BQQ3 440 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 WWP1Q9H0M0 922 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 CHST8Q9H2A9 424 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 KIR3DX1Q9H7L2 352 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 HRASLS2Q9NWW9 162 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 HACD3Q9P035 362 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 VPS4AQ9UN37 437 aa17.96■□□□□ 0.47
CCDC43-204ENST00000588687 FARSAQ9Y285 508 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms