RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 OR52K1Q8NGK4 314 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CALML6Q8TD86 181 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 BCAS4Q8TDM0 211 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 DCAKDQ8WVC6 231 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 GRAMD1AQ96CP6 724 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 RNF31Q96EP0 1072 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CHMP6Q96FZ7 201 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 IMP4Q96G21 291 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 CERS2Q96G23 380 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PDXPQ96GD0 296 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 APOPT1Q96IL0 206 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LENG8Q96PV6 779 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 GFM1Q96RP9 751 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 RANBP9Q96S59 729 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 PLCD4Q9BRC7 762 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 WDR83Q9BRX9 315 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 CINPQ9BW66 212 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 CEP41Q9BYV8 373 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SLC13A1Q9BZW2 595 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 CEP44Q9C0F1 390 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SLC6A16Q9GZN6 736 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 NOL6Q9H6R4 1146 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 SUDS3Q9H7L9 328 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 ARNT2Q9HBZ2 717 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 KCNK9Q9NPC2 374 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 UBA2Q9UBT2 640 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 CTNNAL1Q9UBT7 734 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SOX13Q9UN79 622 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 GPR34Q9UPC5 381 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 DOLKQ9UPQ8 538 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 LOXL2Q9Y4K0 774 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 RPS6KL1Q9Y6S9 549 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 SCN8AQ9UQD0 1980 aa7.76□□□□□ -1.17
VMP1-204ENST00000587259 TLN1Q9Y490 2541 aaKnown RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 UBR5O95071 2799 aaPredicted RBP7.76□□□□□ -1.17
VMP1-204ENST00000587259 DOPEY2Q9Y3R5 2298 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 EBAG9O00559 213 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 AREL1O15033 823 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 TSPAN6O43657 245 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 AVILO75366 819 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 TMCC1O94876 653 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 PCCBP05166 539 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 FGF1P05230 155 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 KRT4P19013 534 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ADRA1DP25100 572 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 GP5P40197 560 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 POLD2P49005 469 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 RPIAP49247 311 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CSRP3P50461 194 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 HK3P52790 923 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CSE1LP55060 971 aaKnown RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 INHBCP55103 352 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ITKQ08881 620 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 NIPAL4Q0D2K0 466 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 INPP5AQ14642 412 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 TBR1Q16650 682 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ZSCAN26Q16670 478 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 WSCD2Q2TBF2 565 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 GRTP1Q5TC63 336 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 GKAP1Q5VSY0 366 aaPredicted RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 RETSATQ6NUM9 610 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ESRP1Q6NXG1 681 aaKnown RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 GDPD4Q6W3E5 623 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 MACC1Q6ZN28 852 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 TIFABQ6ZNK6 161 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 RGS9BPQ6ZS82 235 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CCDC91Q7Z6B0 441 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 IGDCC3Q8IVU1 814 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 TP53INP2Q8IXH6 220 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 PELI3Q8N2H9 469 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CNTD1Q8N815 330 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ARL10Q8N8L6 244 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 IPMKQ8NFU5 416 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 OR2AP1Q8NGE2 309 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CCL4L1Q8NHW4 92 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CXorf40AQ8TE69 158 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 BTN2A2Q8WVV5 523 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 USP7Q93009 1102 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 NAT6Q93015 286 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 ZNF669Q96BR6 464 aaPredicted RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 SGF29Q96ES7 293 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 CCDC97Q96F63 343 aaPredicted RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 LIN37Q96GY3 246 aaPredicted RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 MAGEB18Q96M61 343 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 PSKH2Q96QS6 385 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 SPSB2Q99619 263 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 MGME1Q9BQP7 344 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 FAM167BQ9BTA0 163 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 MLPHQ9BV36 600 aaPredicted RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 KIFC1Q9BW19 673 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 SEMA6CQ9H3T2 930 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 PDFQ9HBH1 243 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 PPANQ9NQ55 473 aaKnown RBP7.75□□□□□ -1.17
VMP1-204ENST00000587259 STARD5Q9NSY2 213 aa7.75□□□□□ -1.17
VMP1-204ENST00000587259 SYBUQ9NX95 663 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms