RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 CDKL1Q00532 357 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 STX5Q13190 355 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 CES5AQ6NT32 575 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 SYCE2Q6PIF2 218 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 SERPINA13PQ6UXR4 307 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 DDIASQ8IXT1 998 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 TCAIMQ8N3R3 496 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 PIP4K2CQ8TBX8 421 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 SUSD6Q92537 303 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 STMN2Q93045 179 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 ELSPBP1Q96BH3 223 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 SERPINI1Q99574 410 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 RIOK2Q9BVS4 552 aaKnown RBP13.96□□□□□ -0.17
LIG3-205ENST00000585941 TMEM245Q9H330 911 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 MTG2Q9H4K7 406 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 DYRK4Q9NR20 520 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 SUN2Q9UH99 717 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 CD84Q9UIB8 345 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 TMPRSS11EQ9UL52 423 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 PPM1HQ9ULR3 514 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 G3BP2Q9UN86 482 aaKnown RBP13.96□□□□□ -0.17
LIG3-205ENST00000585941 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
LIG3-205ENST00000585941 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
LIG3-205ENST00000585941 A0A088AWK7 358 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 TBC1D3BA6NDS4 549 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 OTOL1A6NHN0 477 aaPredicted RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 EPOPA6NHQ4 379 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 PPP6CO00743 305 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 WNT9AO14904 365 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SLC16A5O15375 505 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 LBPP18428 481 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 CCR7P32248 378 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ETV3P41162 512 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 HYAL1Q12794 435 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SP140Q13342 867 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 FASTKQ14296 549 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 ZNF234Q14588 700 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ACOX1Q15067 660 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 FBXL19Q6PCT2 694 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SPATA19Q7Z5L4 167 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SCAMP4Q969E2 229 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 EGFL8Q99944 293 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 APOL5Q9BWW9 433 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 AKTIPQ9H8T0 292 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 RIC8BQ9NVN3 520 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 TCF20Q9UGU0 1960 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 C1QTNF3-AMACRE9PGA6 284 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ENTPD5O75356 428 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ANXA5P08758 320 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 PSMC3P17980 439 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 OPRD1P41143 372 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 MAPK9P45984 424 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 NUDT2P50583 147 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 GRIK2Q13002 908 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ART3Q13508 389 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 GTF2H2Q13888 395 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 PTK2BQ14289 1009 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 KPNB1Q14974 876 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 GSTA3Q16772 222 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 GTF2H2CQ6P1K8 395 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 PGM2L1Q6PCE3 622 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 DEFB107AQ8IZN7 70 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ASZ1Q8WWH4 475 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 GLYATL1Q969I3 302 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 RAB7BQ96AH8 199 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 AP2M1Q96CW1 435 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 COQ10AQ96MF6 247 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 SLC25A23Q9BV35 468 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 CD244Q9BZW8 370 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 WWOXQ9NZC7 414 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
LIG3-205ENST00000585941 SLC7A8Q9UHI5 535 aa13.95□□□□□ -0.18
LIG3-205ENST00000585941 MYO9BQ13459 2157 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 AIM2O14862 343 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 NPC1O15118 1278 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 GM2AP17900 193 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 GJA4P35212 333 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 GRIA2P42262 883 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 FOXA1P55317 472 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 TBL3Q12788 808 aaKnown RBP13.94□□□□□ -0.18
LIG3-205ENST00000585941 C1orf146Q5VVC0 180 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 GOLGA7Q7Z5G4 137 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 NLRP8Q86W28 1048 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 PGAM4Q8N0Y7 254 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 RHBDF1Q96CC6 855 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 DTD2Q96FN9 168 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 MARK4Q96L34 752 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 C3orf30Q96M34 536 aa13.94□□□□□ -0.18
LIG3-205ENST00000585941 RIPOR3Q96MK2 946 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms