RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 PSMD11O00231 422 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 TRIM38O00635 465 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 E2F3O00716 465 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 SLC16A5O15375 505 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 GPR39O43194 453 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 NRP2O60462 931 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 LEFTY1O75610 366 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 OTCP00480 354 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 C8GP07360 202 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ENO2P09104 434 aaPredicted RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 BMP1P13497 986 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 ANPEPP15144 967 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ITGB6P18564 788 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ME2P23368 584 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 AGTR2P50052 363 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 CDKL1Q00532 357 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 GTF2H2Q13888 395 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 EIF4HQ15056 248 aaKnown RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 RPS6KA2Q15349 733 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 PPP1R3AQ16821 1122 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 EML3Q32P44 896 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 COQ5Q5HYK3 327 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 PLEKHS1Q5SXH7 462 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 REP15Q6BDI9 236 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ERAP2Q6P179 960 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 GTF2H2CQ6P1K8 395 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 LRRC74BQ6ZQY2 392 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 GK5Q6ZS86 529 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 NEK10Q6ZWH5 1172 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 DPPA4Q7L190 304 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 SYVN1Q86TM6 617 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 PHYKPLQ8IUZ5 450 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 NRSN1Q8IZ57 195 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 TRAM1L1Q8N609 369 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 LKAAEAR1Q8TD35 194 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 BPIFB1Q8TDL5 484 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ROPN1LQ96C74 230 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 EGFL8Q99944 293 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 LRFN3Q9BTN0 628 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 SPATA16Q9BXB7 569 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 FAM83DQ9H4H8 585 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 WWOXQ9NZC7 414 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 POLG2Q9UHN1 485 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 EIF2B4Q9UI10 523 aaKnown RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 PTBP2Q9UKA9 531 aaKnown RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 ANGPTL3Q9Y5C1 460 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 ATG2AQ2TAZ0 1938 aa11.09□□□□□ -0.63
LIG3-204ENST00000585740 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
LIG3-204ENST00000585740 MYO7AQ13402 2215 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 A8MX80 341 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 MRASO14807 208 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PER2O15055 1255 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 NVLO15381 856 aaKnown RBP11.08□□□□□ -0.64
LIG3-204ENST00000585740 MAP3K7O43318 606 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 TBX10O75333 385 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PDE5AO76074 875 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 WDR47O94967 919 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 FTH1P02794 183 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PRNPP04156 253 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CA3P07451 260 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ANXA5P08758 320 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PRR35P0CG20 571 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ATP1B2P14415 290 aaPredicted RBP11.08□□□□□ -0.64
LIG3-204ENST00000585740 TIMP2P16035 220 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 MSH3P20585 1137 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 GPX3P22352 226 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 MAPK9P45984 424 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PSMD8P48556 350 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 FOXA1P55317 472 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PSME3P61289 254 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 TFF2Q03403 129 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 SP140Q13342 867 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 TAF11Q15544 211 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 MUM1Q2TAK8 710 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 SMU1Q2TAY7 513 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 SPATS1Q496A3 300 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ATP13A5Q4VNC0 1218 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 XKR7Q5GH72 579 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 PIGGQ5H8A4 983 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CYHR1Q6ZMK1 362 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 GOLGA7Q7Z5G4 137 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 CYB5D2Q8WUJ1 264 aa11.08□□□□□ -0.64
LIG3-204ENST00000585740 DLG3Q92796 817 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms