RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
CSNK1D-224ENST00000584672 RBM22Q9NW64 420 aaKnown RBP eCLIP13.78□□□□□ -0.25e-11■□□□□ 8.5
CSNK1D-224ENST00000584672 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 GPR89AB7ZAQ6 455 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 ALOX12BO75342 701 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 HLA-DQB2P05538 268 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 GPR89BP0CG08 455 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 COX6B1P14854 86 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 VCLP18206 1134 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 CA4P22748 312 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 PBLDP30039 288 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 SERPINB6P35237 376 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 KPNA2P52292 529 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 MLIPQ5VWP3 458 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 TXNRD3NBQ6F5E7 133 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 ARMC6Q6NXE6 501 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 FAM83HQ6ZRV2 1179 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 OOSP2Q86WS3 158 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 GDAP1Q8TB36 358 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 FER1L6-AS2Q96M78 137 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 WDR77Q9BQA1 342 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 ZFYVE1Q9HBF4 777 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 LATS2Q9NRM7 1088 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 FAM8A1Q9UBU6 413 aa13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 PTRH2Q9Y3E5 179 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-224ENST00000584672 NAV3Q8IVL0 2385 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 SEC16AO15027 2179 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 A0A1B0GUH1 482 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 PEX12O00623 359 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 MFSD11O43934 449 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 EDN3P14138 238 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 POLR2CP19387 275 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 CD86P42081 329 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 ZNF165P49910 485 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 ZNF135P52742 658 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 KCNK10P57789 538 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 CDC16Q13042 620 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 MMRN1Q13201 1228 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 XRCC4Q13426 336 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 SLC9A5Q14940 896 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 DPYSL2Q16555 572 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 ZNF789Q5FWF6 425 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 ZFYVE27Q5T4F4 411 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 RAVER1Q8IY67 606 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 TRAM1L1Q8N609 369 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 KLHL25Q9H0H3 589 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 P4HTMQ9NXG6 502 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 TMPRSS11EQ9UL52 423 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 BTRCQ9Y297 605 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 PADI2Q9Y2J8 665 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
CSNK1D-224ENST00000584672 DOCK10Q96BY6 2186 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 ANKRD66B4E2M5 251 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 VEGFDO43915 354 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 KLF7O75840 302 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 STSP08842 583 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 CDH3P22223 829 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 HTR1EP28566 365 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 PTGER4P35408 488 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 LMAN1P49257 510 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 KRTAP10-9P60411 292 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 RPL26P61254 145 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 ART3Q13508 389 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 GTF2H3Q13889 308 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 NFE2L1Q14494 772 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 ALG1LQ6GMV1 187 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 DNAJB14Q8TBM8 379 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 GBP5Q96PP8 586 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 PCDH18Q9HCL0 1135 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 RPL26L1Q9UNX3 145 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 NUP210LQ5VU65 1888 aa13.75□□□□□ -0.21
CSNK1D-224ENST00000584672 ZNF749O43361 778 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 POP7O75817 140 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 RARAP10276 462 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 MTHFD1P11586 935 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 BPIP17213 487 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 EEF1GP26641 437 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 FOLR3P41439 243 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 PREPP48147 710 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 TMEM115Q12893 351 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 KRT31Q15323 416 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 AMZ2Q86W34 360 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 NEK11Q8NG66 645 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 MAML1Q92585 1016 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 GPR63Q9BZJ6 419 aa13.74□□□□□ -0.21
CSNK1D-224ENST00000584672 TRIM8Q9BZR9 551 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms