RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 RNF175Q8N4F7 328 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 CHST14Q8NCH0 376 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LRRC58Q96CX6 371 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TCEAL4Q96EI5 215 aa11.14□□□□□ -0.63
TOP3A-217ENST00000584582 LEF1Q9UJU2 399 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-217ENST00000584582 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PLK4O00444 970 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 TGM5O43548 720 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PCDH8O95206 1070 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PEX11BO96011 259 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CYP4B1P13584 511 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 S100A3P33764 101 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SPAM1P38567 509 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 NAE1Q13564 534 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CHST9Q7L1S5 443 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 EFL1Q7Z2Z2 1120 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PHACTR4Q8IZ21 702 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 LIN28AQ9H9Z2 209 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ANAPC2Q9UJX6 822 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 IKZF3Q9UKT9 509 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CCL26Q9Y258 94 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SLC22A14Q9Y267 594 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ORC6Q9Y5N6 252 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 DRGXA6NNA5 263 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 UROSP10746 265 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PREPP48147 710 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 IRF5Q13568 498 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SF1Q15637 639 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ZNF423Q2M1K9 1284 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 FNDC3BQ53EP0 1204 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 MPPE1Q53F39 396 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 XKR6Q5GH73 641 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CCSAPQ6IQ19 270 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 FBXL19Q6PCT2 694 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 BNIPLQ7Z465 357 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 LIX1Q8N485 282 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 OR2T3Q8NH03 318 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 KLK6Q92876 244 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 FOXJ1Q92949 421 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 MAGED4Q96JG8 741 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ANKRD27Q96NW4 1050 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ASB2Q96Q27 587 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 MGME1Q9BQP7 344 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 COQ6Q9Y2Z9 468 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 CFAP20Q9Y6A4 193 aaKnown RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 RGS14O43566 566 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 MAN1A2O60476 641 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 POLD2P49005 469 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SPIDRQ14159 915 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 AASDHQ4L235 1098 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SETMARQ53H47 684 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-217ENST00000584582 GALNT10Q86SR1 603 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 RETREG3Q86VR2 466 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PDSS2Q86YH6 399 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 SYT12Q8IV01 421 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 KRTCAP2Q8N6L1 136 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 OR2AP1Q8NGE2 309 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 FOPNLQ96NB1 174 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 BRD9Q9H8M2 597 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 PRSS21Q9Y6M0 314 aa11.13□□□□□ -0.63
TOP3A-217ENST00000584582 ANK1P16157 1881 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 EVPLLA8MZ36 301 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 HS6ST1O60243 411 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ZBTB11O95625 1053 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 EPOP01588 193 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 LAG3P18627 525 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 GSK3BP49841 420 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ATP13A5Q4VNC0 1218 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 PIGGQ5H8A4 983 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ANKRD26P1Q6NSI1 321 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 LETMD1Q6P1Q0 360 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 GOLGA7Q7Z5G4 137 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CLVS1Q8IUQ0 354 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 FAM110BQ8TC76 370 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 DLG3Q92796 817 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 HIC2Q96JB3 615 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 UBXN10Q96LJ8 280 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ARMC7Q9H6L4 198 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ARNT2Q9HBZ2 717 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 IL26Q9NPH9 171 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 EXD2Q9NVH0 621 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 KIF17Q9P2E2 1029 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 B4GALT6Q9UBX8 382 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CNOT6Q9ULM6 557 aaKnown RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TNPO3Q9Y5L0 923 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms