RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SPASTQ9UBP0 616 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 GULP1Q9UBP9 304 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 KLF15Q9UIH9 416 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ACSL5Q9ULC5 683 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 CRYL1Q9Y2S2 319 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 MED16Q9Y2X0 877 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 TMEM98Q9Y2Y6 226 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 IKBKGQ9Y6K9 419 aa10.23□□□□□ -0.77
CCDC47-203ENST00000580986 ZFC3H1O60293 1989 aaKnown RBP10.23□□□□□ -0.77
CCDC47-203ENST00000580986 NEMP2A6NFY4 417 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 OR2AG2A6NM03 316 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 PATE3B3GLJ2 98 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 LMO7DNF2Z398 122 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 AQP9O43315 295 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 CDH16O75309 829 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 FAM155BO75949 473 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 KRT38O76015 456 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 CBSLP0DN79 551 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ENGP17813 658 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 TGM1P22735 817 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 EPHA8P29322 1005 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 CBSP35520 551 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 MSH2P43246 934 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 MAPK9P45984 424 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 GNPDA1P46926 289 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 IRX4P78413 519 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ARHGAP8P85298 464 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ZKSCAN8Q15776 578 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 HLA-BQ31612 363 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 TTLL9Q3SXZ7 439 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 PLEKHS1Q5SXH7 462 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 LGSNQ5TDP6 509 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 AGAP9Q5VTM2 703 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 METRNLQ641Q3 311 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 KCTD16Q68DU8 428 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 DOK6Q6PKX4 331 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 DBX2Q6ZNG2 339 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 KANSL1Q7Z3B3 1105 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 HID1Q8IV36 788 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 IQCKQ8N0W5 287 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF548Q8NEK5 533 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 DCAKDQ8WVC6 231 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ASZ1Q8WWH4 475 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 GLMNQ92990 594 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 TSACCQ96A04 125 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 MTBPQ96DY7 904 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 CCDC97Q96F63 343 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 DUSP23Q9BVJ7 150 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 MRPL40Q9NQ50 206 aaKnown RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 SEMA4GQ9NTN9 838 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 FAM86C1Q9NVL1 165 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 EURLQ9NYK6 297 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 PSMC3IPQ9P2W1 217 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 ZNHIT2Q9UHR6 403 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 DHRS7Q9Y394 339 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 PCYT1BQ9Y5K3 369 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-203ENST00000580986 PRSS21Q9Y6M0 314 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 RALGAPA1Q6GYQ0 2036 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
CCDC47-203ENST00000580986 COL5A1P20908 1838 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 FAM95CA0A1B0GW59 222 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 SLC5A10A0PJK1 596 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 CCDC189A1A4V9 331 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 A6NCN8 305 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 OR5K4A6NMS3 321 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 E5RI56 91 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 VPS26AO75436 327 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 GPC4O75487 556 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 POP7O75817 140 aaKnown RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 KRT37O76014 449 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 SLCO2B1O94956 709 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 ITGA2BP08514 1039 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 ENO3P13929 434 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 CTSEP14091 401 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 SLC2A4P14672 509 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 FDXRP22570 491 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 DGKAP23743 735 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 AOAHP28039 575 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 GCAP28676 217 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 FMO4P31512 558 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 SLC26A3P40879 764 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 CSRP3P50461 194 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 CLCN7P51798 805 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 EFTUD2Q15029 972 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 TMED2Q15363 201 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 SHBQ15464 509 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 INSCQ1MX18 579 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 PRRT3Q5FWE3 981 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 ZNF648Q5T619 568 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 ABRAXAS1Q6UWZ7 409 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 LRIG3Q6UXM1 1119 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 TIFABQ6ZNK6 161 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 NEK10Q6ZWH5 1172 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 DET1Q7L5Y6 550 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 CHST15Q7LFX5 561 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-203ENST00000580986 OTOAQ7RTW8 1153 aa10.21□□□□□ -0.77
CCDC47-203ENST00000580986 GKN2Q86XP6 184 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms