RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MROH9Q5TGP6 573 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 METRNLQ641Q3 311 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 TAF8Q7Z7C8 310 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ZNF547Q8IVP9 402 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 IQCKQ8N0W5 287 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 GPBAR1Q8TDU6 330 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ATXN7L3BQ96GX2 97 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 MCMBPQ9BTE3 642 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 DHRS4Q9BTZ2 278 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 TMEM168Q9H0V1 697 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ACBD3Q9H3P7 528 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 DPEP2Q9H4A9 486 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 SARS2Q9NP81 518 aaKnown RBP14.04□□□□□ -0.16
SKA2-205ENST00000580541 KLC4Q9NSK0 619 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 TLK1Q9UKI8 766 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 SLC39A10Q9ULF5 831 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 DHRS7Q9Y394 339 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CABIN1Q9Y6J0 2220 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 A0A1B0GTQ1 180 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 OR5K4A6NMS3 321 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 IFRD1O00458 451 aaPredicted RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 TPP1O14773 563 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 AQP9O43315 295 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 SGTAO43765 313 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 FUCA1P04066 466 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 SHBGP04278 402 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 ANXA6P08133 673 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 ZNF883P0CG24 379 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 ALPPL2P10696 532 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 ENO3P13929 434 aaPredicted RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 ENGP17813 658 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 SAT1P21673 171 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 AOAHP28039 575 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 TYK2P29597 1187 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 PBLDP30039 288 aaPredicted RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 HALP42357 657 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 CCT8P50990 548 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 CTBSQ01459 385 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 EFTUD2Q15029 972 aaKnown RBP eCLIP14.03□□□□□ -0.168e-12■■■■□ 22.2
SKA2-205ENST00000580541 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 WASH2PQ6VEQ5 465 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 RAPH1Q70E73 1250 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 NKAPQ8N5F7 415 aaKnown RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 ZBTB2Q8N680 514 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 PNPLA1Q8N8W4 532 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 AVL9Q8NBF6 648 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 LMX1AQ8TE12 382 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 DCAKDQ8WVC6 231 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 GLMNQ92990 594 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 CABS1Q96KC9 395 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 FOPNLQ96NB1 174 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 NDNQ99608 321 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 DUSP23Q9BVJ7 150 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 GTPBP2Q9BX10 602 aaKnown RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 STMN4Q9H169 189 aaPredicted RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 OSGEPL1Q9H4B0 414 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 VIPAS39Q9H9C1 493 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 WASH6PQ9NQA3 447 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 FAM86C1Q9NVL1 165 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 SLC17A6Q9P2U8 582 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 MTO1Q9Y2Z2 717 aaKnown RBP14.03□□□□□ -0.16
SKA2-205ENST00000580541 PRKAB1Q9Y478 270 aa14.03□□□□□ -0.16
SKA2-205ENST00000580541 IQCF5A8MTL0 148 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 PATE3B3GLJ2 98 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 LMO7DNF2Z398 122 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SCAMP1O15126 338 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 NIPSNAP2O75323 286 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 PIAS2O75928 621 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 FAM155BO75949 473 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 MPOP05164 745 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 MYZAPP0CAP1 466 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 ITGB6P18564 788 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 KRT15P19012 456 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 FDXRP22570 491 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 CCR7P32248 378 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SLC26A3P40879 764 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 ACTR1BP42025 376 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SERPINB8P50452 374 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 IL2P60568 153 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 RAB10P61026 200 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 ACTR1AP61163 376 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SPEM2Q0P670 501 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 HSPA14Q0VDF9 509 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SLC14A1Q13336 389 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 BOP1Q14137 746 aaKnown RBP14.02□□□□□ -0.17
SKA2-205ENST00000580541 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.17
SKA2-205ENST00000580541 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 TIFABQ6ZNK6 161 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 C11orf96Q7Z7L8 435 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 KRT222Q8N1A0 295 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 DCLK2Q8N568 766 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 TSNARE1Q96NA8 513 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 GPR21Q99679 349 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 GPAMQ9HCL2 828 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 SEMA4GQ9NTN9 838 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 EVA1BQ9NVM1 165 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 KLF15Q9UIH9 416 aa14.02□□□□□ -0.17
SKA2-205ENST00000580541 DNAJC16Q9Y2G8 782 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms