RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PNOCQ13519 176 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 ALS2CLQ60I27 953 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 ISLR2Q6UXK2 745 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 SHISA6Q6ZSJ9 500 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 ARHGAP12Q8IWW6 846 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 PHC2Q8IXK0 858 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 NPWQ8N729 165 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 AMER2Q8N7J2 671 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 MAGED4Q96JG8 741 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 NRTNQ99748 197 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 DHRS4Q9BTZ2 278 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 CATSPERBQ9H7T0 1116 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 C1GALT1Q9NS00 363 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 IFT80Q9P2H3 777 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 NDOR1Q9UHB4 597 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 ARHGAP42A6NI28 874 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 FAM90A27PA6NNH2 459 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 RNF212BA8MTL3 300 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 FAM227AF5H4B4 570 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 SOCS6O14544 535 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 PVRP15151 417 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 IGFBP2P18065 325 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 GALNT3Q14435 633 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 LBRQ14739 615 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 AGAP9Q5VTM2 703 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 NAA35Q5VZE5 725 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 TRIM65Q6PJ69 517 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 ABRAXAS1Q6UWZ7 409 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 ADGRG6Q86SQ4 1221 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF547Q8IVP9 402 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 PTERQ96BW5 349 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 PSKH2Q96QS6 385 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 UCK2Q9BZX2 261 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 LHPPQ9H008 270 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 GPAMQ9HCL2 828 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 ABI3Q9P2A4 366 aa13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 DHCR7Q9UBM7 475 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-213ENST00000580446 E7EQ34 232 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 FOXN3O00409 490 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 POLR2CP19387 275 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 DGKQP52824 942 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 TPI1P60174 286 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 CAMK4Q16566 473 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 DEFB110Q30KQ9 67 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 KHDC1Q4VXA5 237 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 ISM2Q6H9L7 571 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 ENOSF1Q7L5Y1 443 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 SPOCK2Q92563 424 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 CD180Q99467 661 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
CSNK1D-213ENST00000580446 C2CD4BA6NLJ0 364 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 INAFM1C9JVW0 142 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 HCRTR1O43613 425 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 RASAL1O95294 804 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 PYGLP06737 847 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 ST6GAL1P15907 406 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 CDH3P22223 829 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 IDSP22304 550 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 CDH5P33151 784 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 TNFSF10P50591 281 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 LRRC63Q05C16 580 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 ADCY2Q08462 1091 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 DMPKQ09013 629 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 RPE65Q16518 533 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 HENMT1Q5T8I9 393 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 ARMC6Q6NXE6 501 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 KLHL35Q6PF15 583 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 RBM12BQ8IXT5 1001 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 AGAP11Q8TF27 550 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 NUDCD1Q96RS6 583 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 SPRTNQ9H040 489 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.61□□□□□ -0.235e-10■■■■■ 31.1
CSNK1D-213ENST00000580446 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF395Q9H8N7 513 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 IMP3Q9NV31 184 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 LRFN1Q9P244 771 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 PTGFRNQ9P2B2 879 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 TLN2Q9Y4G6 2542 aa13.61□□□□□ -0.23
CSNK1D-213ENST00000580446 HRNRQ86YZ3 2850 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 TRAV17A0A0B4J275 112 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 ZNF202O95125 648 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 SLC25A14O95258 325 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 UGT1A4P22310 534 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 CMA1P23946 247 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 DNASE1P24855 282 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 TMPRSS15P98073 1019 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 HSF1Q00613 529 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 IL10RBQ08334 325 aa13.6□□□□□ -0.23
CSNK1D-213ENST00000580446 IHHQ14623 411 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms