RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 REXO1L1PQ8IX06 675 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 HM13Q8TCT9 377 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 ZFPM2Q8WW38 1151 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 CCM2Q9BSQ5 444 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 DDA1Q9BW61 102 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 RAB33BQ9H082 229 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 FAM96AQ9H5X1 160 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 PIH1D1Q9NWS0 290 aaKnown RBP14.54□□□□□ -0.08
SS18-212ENST00000579061 OGFRQ9NZT2 677 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 EPHA6Q9UF33 1036 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 TTC7AQ9ULT0 858 aaPredicted RBP14.54□□□□□ -0.08
SS18-212ENST00000579061 SDK2Q58EX2 2172 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 C9orf172C9J069 976 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 AP3B1O00203 1094 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 QSOX1O00391 747 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 TOX3O15405 576 aaPredicted RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 AP2A2O94973 939 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 LIPCP11150 499 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 AMD1P17707 334 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 MPSTP25325 297 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 MSNP26038 577 aaKnown RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 PBLDP30039 288 aaPredicted RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 CXCR5P32302 372 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 FOXN2P32314 431 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 GRIA1P42261 906 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 CDKN1CP49918 316 aaPredicted RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 RAB15P59190 212 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 CDK16Q00536 496 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 ACVR1Q04771 509 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 CLN3Q13286 438 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 GPR18Q14330 331 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 ITIH4Q14624 930 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 TSTD2Q5T7W7 516 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 TAS2R42Q7RTR8 314 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 GSTA5Q7RTV2 222 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 GPR155Q7Z3F1 870 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 PRUNE1Q86TP1 453 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 PRELID2Q8N945 189 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 SNRNP27Q8WVK2 155 aaKnown RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.08
SS18-212ENST00000579061 CRELD1Q96HD1 420 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 SGSM3Q96HU1 749 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 FCRL3Q96P31 734 aaPredicted RBP14.53□□□□□ -0.08
SS18-212ENST00000579061 ASPSCR1Q9BZE9 553 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 PSMD13Q9UNM6 376 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 CACNA1GO43497 2377 aa14.53□□□□□ -0.08
SS18-212ENST00000579061 MTHFD1P11586 935 aaKnown RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 NSG1P42857 185 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 CAPZBP47756 277 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 KCNJ1P48048 391 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 ARSDP51689 593 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 DBN1Q16643 649 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 SNAP47Q5SQN1 464 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 LYPLAL1Q5VWZ2 237 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 CAPRIN2Q6IMN6 1127 aaKnown RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 KLHL35Q6PF15 583 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 XKR5Q6UX68 686 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 PACS1Q6VY07 963 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 PIANPQ8IYJ0 282 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 BMPERQ8N8U9 685 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 OR13J1Q8NGT2 312 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 ANP32BQ92688 251 aaKnown RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 C9orf72Q96LT7 481 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 TEFMQ96QE5 360 aaKnown RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 INSM2Q96T92 566 aaPredicted RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 NAP1L3Q99457 506 aaPredicted RBP14.52□□□□□ -0.09
SS18-212ENST00000579061 TTC1Q99614 292 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 WWP1Q9H0M0 922 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 FBXO8Q9NRD0 319 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 OCIAD1Q9NX40 245 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 TCAF1Q9Y4C2 921 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 HEBP2Q9Y5Z4 205 aa14.52□□□□□ -0.09
SS18-212ENST00000579061 IGSF10Q6WRI0 2623 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CCDC162PA2VCL2 907 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 EFCAB7A8K855 629 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 A8MU76 341 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 AGRPO00253 132 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 SLC35G4P0C7Q5 338 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 TYRP1P17643 537 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 TPSB2P20231 275 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 NDUFS1P28331 727 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CD151P48509 253 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 NPY2RP49146 381 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 GFERP55789 205 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CXADRP78310 365 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 BASP1P80723 227 aaKnown RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 MC2RQ01718 297 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 RPA4Q13156 261 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 TPSAB1Q15661 275 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 ZNF658BQ4V348 819 aaPredicted RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 PCID2Q5JVF3 399 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 AFTPHQ6ULP2 937 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CERS6Q6ZMG9 384 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 PRSS42Q7Z5A4 293 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms