RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 SAT1P21673 171 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 AKT2P31751 481 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 NUDT1P36639 197 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ABL2P42684 1182 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 SLC1A2P43004 574 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 DUSP3P51452 185 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 NEK3P51956 506 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ERVPABLB-1P60509 514 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 TMPRSS15P98073 1019 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 POU4F1Q01851 419 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ACVR1Q04771 509 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 TRAF2Q12933 501 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 NFATC3Q12968 1075 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CTBP1Q13363 440 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 DLG2Q15700 870 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 DBN1Q16643 649 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CDKN3Q16667 212 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 MYLK3Q32MK0 819 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CCDC153Q494R4 210 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CARD16Q5EG05 197 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 RNF187Q5TA31 235 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 AGBL4Q5VU57 503 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CDCP2Q5VXM1 449 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 Q6ZVU0 165 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 PTAR1Q7Z6K3 402 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 GALNT7Q86SF2 657 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ZC3HC1Q86WB0 502 aaKnown RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 TRIM69Q86WT6 500 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CACNA2D3Q8IZS8 1091 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 C2CD4AQ8NCU7 369 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 OR13H1Q8NG92 308 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 OR4L1Q8NH43 312 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 RAB3IL1Q8TBN0 382 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 FRS2Q8WU20 508 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ELMO2Q96JJ3 720 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 ZNF641Q96N77 438 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 GPR22Q99680 433 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 PLCD4Q9BRC7 762 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 DPH1Q9BZG8 443 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CCDC68Q9H2F9 335 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 TNKS2Q9H2K2 1166 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 RABEP2Q9H5N1 569 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 MAGEE1Q9HCI5 957 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 CATSPERZQ9NTU4 200 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 NLE1Q9NVX2 485 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 DNAJC28Q9NX36 388 aa10.06□□□□□ -0.8
SS18-210ENST00000578700 HECAQ9UBI9 543 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 CORO1CQ9ULV4 474 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 MTO1Q9Y2Z2 717 aaKnown RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 HEMK1Q9Y5R4 338 aaPredicted RBP10.06□□□□□ -0.8
SS18-210ENST00000578700 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 DOCK4Q8N1I0 1966 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 A0A087X1B8 175 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 A0A096LPK6 155 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 FAM95CA0A1B0GW59 222 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 NEMP2A6NFY4 417 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 K7ESM1 405 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 KPNA3O00505 521 aaPredicted RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 BIRC5O15392 142 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 NDUFS3O75489 264 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 KIAA0754O94854 1291 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 SLC4A1P02730 911 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 AHSGP02765 367 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ALDOAP04075 364 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 PIRTP0C851 137 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 COL6A2P12110 1019 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 LEPRP48357 1165 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 PDE1CQ14123 709 aaPredicted RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 QPCTQ16769 361 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ISXQ2M1V0 245 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 KLC3Q6P597 504 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 RGS9BPQ6ZS82 235 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 Q6ZSR6 202 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 USP45Q70EL2 814 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 TBC1D1Q86TI0 1168 aaPredicted RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 CAMK1DQ8IU85 385 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 NUDCD3Q8IVD9 361 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 DENND6AQ8IWF6 608 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 PLPP6Q8IY26 295 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 LRRC34Q8IZ02 419 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 GPATCH11Q8N954 259 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 OR13J1Q8NGT2 312 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 GPR150Q8NGU9 434 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ISL2Q96A47 359 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ARRDC3Q96B67 414 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 MED8Q96G25 268 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 DNAJC1Q96KC8 554 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 TCF12Q99081 682 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 C19orf43Q9BQ61 176 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 PITPNM3Q9BZ71 974 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 CPEB1Q9BZB8 566 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 FAM117AQ9C073 453 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 SYNDIG1Q9H7V2 258 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 MANSC1Q9H8J5 431 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 PREBQ9HCU5 417 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms