RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, human

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-222	ENST00000577543	NAP1L3	Q99457	506 aa	Predicted RBP	18.87	■□□□□ 0.61
TGIF1-222	ENST00000577543	VPS37B	Q9H9H4	285 aa		18.87	■□□□□ 0.61
TGIF1-222	ENST00000577543	OR51F1	A6NGY5	319 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	UBXN7	O94888	489 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	SLC35G4	P0C7Q5	338 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	PSMA3	P25788	255 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	CSTF2	P33240	577 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	CAPZB	P47756	277 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	RPE65	Q16518	533 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	METRNL	Q641Q3	311 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	AFTPH	Q6ULP2	937 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	PIANP	Q8IYJ0	282 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	HM13	Q8TCT9	377 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	18.86	■□□□□ 0.61	6e-7	■■■■□ 20.6
TGIF1-222	ENST00000577543	CRELD1	Q96HD1	420 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	PDLIM2	Q96JY6	352 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	SLC40A1	Q9NP59	571 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	IMP3	Q9NV31	184 aa	Known RBP	18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	KLHL3	Q9UH77	587 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	RALY	Q9UKM9	306 aa	Known RBP	18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	TCAF1	Q9Y4C2	921 aa		18.86	■□□□□ 0.61
TGIF1-222	ENST00000577543	CACNA1G	O43497	2377 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	PRAMEF33	A0A0G2JMD5	474 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	CCDC162P	A2VCL2	907 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	KLK10	O43240	276 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	PRAMEF10	O60809	474 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	MTHFD1	P11586	935 aa	Known RBP	18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	TYRP1	P17643	537 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	ADRA1D	P25100	572 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	FOXN2	P32314	431 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	VPS41	P49754	854 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	DBN1	Q16643	649 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	TSTD2	Q5T7W7	516 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	BROX	Q5VW32	411 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	NLRP9	Q7RTR0	991 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	PDZD3	Q86UT5	571 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	FAM129C	Q86XR2	697 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	PLXDC1	Q8IUK5	500 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	OSBPL9	Q96SU4	736 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	AP1M1	Q9BXS5	423 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	DPH1	Q9BZG8	443 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	WWP1	Q9H0M0	922 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	SMARCAL1	Q9NZC9	954 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	OGFR	Q9NZT2	677 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	PDP2	Q9P2J9	529 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	SLC2A6	Q9UGQ3	507 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	ACSL5	Q9ULC5	683 aa		18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543	CFAP20	Q9Y6A4	193 aa	Known RBP	18.85	■□□□□ 0.61
TGIF1-222	ENST00000577543		A8MU76	341 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	NVL	O15381	856 aa	Known RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	CCL4	P13236	92 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	AMD1	P17707	334 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	GFER	P55789	205 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	SESN2	P58004	480 aa	Predicted RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	PRAME	P78395	509 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	ITIH4	Q14624	930 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	PLCL1	Q15111	1095 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	TRIP13	Q15645	432 aa	Predicted RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	KCTD19	Q17RG1	926 aa	Predicted RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	DUS1L	Q6P1R4	473 aa	Known RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	TTC27	Q6P3X3	843 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	XKR5	Q6UX68	686 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	COG1	Q8WTW3	980 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	RSC1A1	Q92681	617 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	USP7	Q93009	1102 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	MAGOHB	Q96A72	148 aa	Known RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	RMDN2	Q96LZ7	410 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	C12orf66	Q96MD2	445 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	FOXJ2	Q9P0K8	574 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	ACSL6	Q9UKU0	697 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	RIMKLB	Q9ULI2	386 aa		18.84	■□□□□ 0.61
TGIF1-222	ENST00000577543	GOLGA6L10	A0A0M3HER8	536 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	USP27X	A6NNY8	438 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	C9orf172	C9J069	976 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	GOT2	P00505	430 aa	Known RBP	18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	FGF3	P11487	239 aa	Predicted RBP	18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	TPSB2	P20231	275 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	NSG1	P42857	185 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	CRADD	P78560	199 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	ACVR1	Q04771	509 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	CLN3	Q13286	438 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	TPSAB1	Q15661	275 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	TMEM164	Q5U3C3	297 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	PACS1	Q6VY07	963 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	CFAP206	Q8IYR0	622 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	LILRA3	Q8N6C8	439 aa	Predicted RBP	18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	CLDN19	Q8N6F1	224 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	PEX13	Q92968	403 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	HDAC10	Q969S8	669 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	ZNF778	Q96MU6	729 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	FCRL3	Q96P31	734 aa	Predicted RBP	18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	TGM7	Q96PF1	710 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	IL22	Q9GZX6	179 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	COG4	Q9H9E3	785 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	WDR70	Q9NW82	654 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	SNX12	Q9UMY4	172 aa		18.83	■□□□□ 0.6
TGIF1-222	ENST00000577543	EFCAB7	A8K855	629 aa		18.82	■□□□□ 0.6
TGIF1-222	ENST00000577543	AP3B1	O00203	1094 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms