RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LAPTM5Q13571 262 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 LCN1P1Q5VSP4 162 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 TRIM40Q6P9F5 258 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 KBTBD7Q8WVZ9 684 aa12.96□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF487B1APH4 448 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 E9PAM4 449 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GABRDO14764 452 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 FPGTO14772 594 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 DGKQP52824 942 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 SMIM11AP58511 58 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GTF2H2Q13888 395 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PAFAH1B3Q15102 231 aaKnown RBP12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 ELMSAN1Q6PJG2 1045 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PHC3Q8NDX5 983 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 ITPAQ9BY32 194 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 RAB23Q9ULC3 237 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 NRCAMQ92823 1304 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR51F1A6NGY5 319 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 H3BMQ9 156 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 ADAMDEC1O15204 470 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 C9P02748 559 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PGRP06401 933 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 HTR7P34969 479 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PTPN5P54829 565 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 KCNAB2Q13303 367 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 IL18Q14116 193 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GK3PQ14409 553 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 KRT74Q7RTS7 529 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 SCML4Q8N228 414 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 GPR156Q8NFN8 814 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 IRGQQ8WZA9 623 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 COG8Q96MW5 612 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 SORT1Q99523 831 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 KIFC1Q9BW19 673 aa12.96□□□□□ -0.34
PCDHGB3-201ENST00000576222 EGFRP00533 1210 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLTBP09497 229 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SDC2P34741 201 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 BMXP51813 675 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 JAG1P78504 1218 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANXA8L1Q5VT79 327 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 DCDC5Q6ZRR9 648 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 PLEKHH3Q7Z736 793 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 RBFAQ8N0V3 343 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 HEPHQ9BQS7 1158 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CYTH4Q9UIA0 394 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SIX4Q9UIU6 781 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 TOPAZ1Q8N9V7 1692 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 STK16O75716 305 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CATP04040 527 aaKnown RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CPOXP36551 454 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CYP4F8P98187 520 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 PIGFQ07326 219 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 STX4Q12846 297 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SNTG1Q9NSN8 517 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 H7C4K7 107 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CXCL11O14625 94 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 VILLO15195 856 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 DNAJB5O75953 348 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 MYCLP1P12525 358 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 RFC2P35250 354 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 PAQR3Q6TCH7 311 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF517Q6ZMY9 492 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKRD13BQ86YJ7 626 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 CPNE9Q8IYJ1 553 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 LRRC20Q8TCA0 184 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF597Q96LX8 424 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 RNF181Q9P0P0 153 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
PCDHGB3-201ENST00000576222 EDIL3O43854 480 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 EPORP19235 508 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 OGNP20774 298 aaKnown RBP12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 GRK4P32298 578 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 EPHX2P34913 555 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CPTPQ5TA50 214 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 DDI2Q5TDH0 399 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms