RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PLK5	Q496M5	336 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PYCR3	Q53H96	274 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	KLC3	Q6P597	504 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	DOK6	Q6PKX4	331 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ENPP7	Q6UWV6	458 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	NEK10	Q6ZWH5	1172 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	C11orf96	Q7Z7L8	435 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	AMZ2	Q86W34	360 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	CENPL	Q8N0S6	344 aa	Predicted RBP	11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	OXR1	Q8N573	874 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	GIMAP7	Q8NHV1	300 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	HM13	Q8TCT9	377 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	LKAAEAR1	Q8TD35	194 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	EEF1AKMT1	Q8WVE0	214 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ELMO1	Q92556	727 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC30A3	Q99726	388 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	TIMM29	Q9BSF4	260 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	TM9SF3	Q9HD45	589 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	IGSF5	Q9NSI5	407 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	KL	Q9UEF7	1012 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ZNHIT2	Q9UHR6	403 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PLLP	Q9Y342	182 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PCDHGA2	Q9Y5H1	932 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	DGKB	Q9Y6T7	804 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PIKFYVE	Q9Y2I7	2098 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TMEM120B	A0PK00	339 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	GALR2	O43603	387 aa	Predicted RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SPAG7	O75391	227 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC34A2	O95436	690 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TSPAN12	O95859	305 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	FUCA1	P04066	466 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	MPC1L	P0DKB6	136 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	ITGB6	P18564	788 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	OAS2	P29728	719 aa	Known RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	HPD	P32754	393 aa	Predicted RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	DPP6	P42658	865 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	MAPK9	P45984	424 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	CLCNKA	P51800	687 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	PGGT1B	P53609	377 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SRP54	P61011	504 aa	Known RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	IRF9	Q00978	393 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	DMPK	Q09013	629 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	CSHL1	Q14406	222 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	LYSMD4	Q5XG99	296 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	KDM7A	Q6ZMT4	941 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	GALNT13	Q8IUC8	556 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	RGL4	Q8IZJ4	473 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	PLD6	Q8N2A8	252 aa	Known RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	BEND7	Q8N7W2	519 aa	Predicted RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	RHEBL1	Q8TAI7	183 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	FAM76A	Q8TAV0	307 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TCP10L	Q8TDR4	215 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	DENND1A	Q8TEH3	1009 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	NAT14	Q8WUY8	206 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	KCTD4	Q8WVF5	259 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	ANKRD49	Q8WVL7	239 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	GLMN	Q92990	594 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TMEM159	Q96B96	161 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	FAM136A	Q96C01	138 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	NXNL1	Q96CM4	212 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC6A18	Q96N87	628 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	GPR78	Q96P69	363 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TFB2M	Q9H5Q4	396 aa	Known RBP	11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	C11orf16	Q9NQ32	467 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	NKIRAS1	Q9NYS0	192 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	OGFR	Q9NZT2	677 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SUSD2	Q9UGT4	822 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	SUFU	Q9UMX1	484 aa		11.69	□□□□□ -0.54
PRPF8-212	ENST00000575116	TLR4	O00206	839 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	VILL	O15195	856 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	BCAT2	O15382	392 aa	Predicted RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	PLIN3	O60664	434 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	RASGRP1	O95267	797 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	TNF	P01375	233 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	GNS	P15586	552 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CD1D	P15813	335 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	MAOB	P27338	520 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	RPA3	P35244	121 aa	Predicted RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	DHPS	P49366	369 aa	Predicted RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	BLK	P51451	505 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	AFF3	P51826	1226 aa	Known RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	HSPA14	Q0VDF9	509 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	DLG1	Q12959	904 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	LRP8	Q14114	963 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	MPP2	Q14168	576 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	FZD2	Q14332	565 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	TEAD4	Q15561	434 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	SEPT7	Q16181	437 aa	Known RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	SYTL3	Q4VX76	610 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	ACSBG2	Q5FVE4	666 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	TPRG1L	Q5T0D9	272 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	METRNL	Q641Q3	311 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CRTC3	Q6UUV7	619 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CYHR1	Q6ZMK1	362 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CDHR3	Q6ZTQ4	885 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CEP68	Q76N32	757 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CPNE9	Q8IYJ1	553 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	CFAP206	Q8IYR0	622 aa		11.68	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC22A15	Q8IZD6	547 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms