RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GSDMCQ9BYG8 508 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 SLCO1B3Q9NPD5 702 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 NPIPB15A6NHN6 443 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 CREB1P16220 341 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 HOXC13P31276 330 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 PGM1P36871 562 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 LRRC74AQ0VAA2 488 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 EIF2B5Q13144 721 aaKnown RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 PDE1CQ14123 709 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 RASA2Q15283 850 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 PHKG1Q16816 387 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 KDELC1Q6UW63 502 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 TMEM135Q86UB9 458 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CDX2Q99626 313 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 TRMOQ9BU70 441 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 SRMSQ9H3Y6 488 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CCDC177Q9NQR7 707 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 SUFUQ9UMX1 484 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 BTRCQ9Y297 605 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 NR5A2O00482 541 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 AZIN1O14977 448 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 OR1I1O60431 355 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 IGLV3-27P01718 113 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 BPIP17213 487 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 PRKCHP24723 683 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 ATP13A5Q4VNC0 1218 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 HORMAD1Q86X24 394 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 TRAM1L1Q8N609 369 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 OR2A12Q8NGT7 310 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 ARRDC2Q8TBH0 407 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 TFGQ92734 400 aaPredicted RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 CPEB1Q9BZB8 566 aaKnown RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 ASPSCR1Q9BZE9 553 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 SORCS3Q9UPU3 1222 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 RAP2CQ9Y3L5 183 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 SIT1Q9Y3P8 196 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 C2CD4DB7Z1M9 353 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 AXIN1O15169 862 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 DYRK3O43781 588 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 LYPLA1O75608 230 aaPredicted RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 CPSF4O95639 269 aaKnown RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 ALDH4A1P30038 563 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 TNFRSF4P43489 277 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 UBAP2Q5T6F2 1119 aaKnown RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 SYCE2Q6PIF2 218 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 PARS2Q7L3T8 475 aaKnown RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 GPR156Q8NFN8 814 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 LMX1AQ8TE12 382 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 IPPKQ9H8X2 491 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 NUDT4Q9NZJ9 180 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 NOP53Q9NZM5 478 aaKnown RBP9.96□□□□□ -0.81
SMG6-213ENST00000573166 LHX3Q9UBR4 397 aa9.96□□□□□ -0.81
SMG6-213ENST00000573166 SYNDIG1LA6NDD5 238 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 E7ESA3 106 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 GJB3O75712 270 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 RFX3P48380 749 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 NUDT2P50583 147 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 COPAP53621 1224 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 CYP4F2P78329 520 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 UAP1L1Q3KQV9 507 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 AMZ1Q400G9 498 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 ZNF648Q5T619 568 aaPredicted RBP9.96□□□□□ -0.82
SMG6-213ENST00000573166 PSAPL1Q6NUJ1 521 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 GPR135Q8IZ08 494 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 CLYBLQ8N0X4 340 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 DCAKDQ8WVC6 231 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 FOXJ1Q92949 421 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 WDR92Q96MX6 357 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 QRFPRQ96P65 431 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 GPR22Q99680 433 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 AIF1LQ9BQI0 150 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 MARCH4Q9P2E8 410 aaPredicted RBP9.96□□□□□ -0.82
SMG6-213ENST00000573166 CPED1A4D0V7 1026 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 HDAC3O15379 428 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 AKAP10O43572 662 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 APBB3O95704 486 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 THRAP10827 490 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 LBPP18428 481 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 TNNI3P19429 210 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 TCN1P20061 433 aaPredicted RBP9.96□□□□□ -0.82
SMG6-213ENST00000573166 PREPP48147 710 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 TAF11Q15544 211 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 IRGCQ6NXR0 463 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 NSL1Q96IY1 281 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 ECSITQ9BQ95 431 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 RMND5AQ9H871 391 aa9.96□□□□□ -0.82
SMG6-213ENST00000573166 INTS7Q9NVH2 962 aaKnown RBP9.96□□□□□ -0.82
SMG6-213ENST00000573166 MUSKO15146 869 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SGTAO43765 313 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 KCNJ2P63252 427 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 IRF9Q00978 393 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 TP53BP2Q13625 1128 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 INPP5AQ14642 412 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 ZNF542PQ5EBM4 170 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms