RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GLIS1Q8NBF1 620 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 JPH3Q8WXH2 748 aaPredicted RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 RMDN2Q96LZ7 410 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 TTC25Q96NG3 672 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 ALS2CR12Q96Q35 445 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 CTRCQ99895 268 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 SLC12A9Q9BXP2 914 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 RAB33BQ9H082 229 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 ZNF768Q9H5H4 540 aaKnown RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 ASB8Q9H765 288 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 AKAP7Q9P0M2 348 aaPredicted RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 EPHA6Q9UF33 1036 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 KLHL3Q9UH77 587 aa16.95■□□□□ 0.3
SMG6-212ENST00000573153 TMEM184BQ9Y519 407 aaPredicted RBP16.95■□□□□ 0.3
SMG6-212ENST00000573153 MGAT4DA6NG13 374 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 CAPN5O15484 640 aaPredicted RBP16.94■□□□□ 0.3
SMG6-212ENST00000573153 PRLHRP49683 370 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 RAB15P59190 212 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 TMPRSS15P98073 1019 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 LY6DQ14210 128 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 FNBP1LQ5T0N5 605 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 DRICH1Q6PGQ1 229 aaPredicted RBP16.94■□□□□ 0.3
SMG6-212ENST00000573153 DET1Q7L5Y6 550 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 PRUNE1Q86TP1 453 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 FAM129CQ86XR2 697 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 RBM12BQ8IXT5 1001 aaKnown RBP16.94■□□□□ 0.3
SMG6-212ENST00000573153 PIANPQ8IYJ0 282 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 OR2L2Q8NH16 312 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 KLHL6Q8WZ60 621 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 INSM2Q96T92 566 aaPredicted RBP16.94■□□□□ 0.3
SMG6-212ENST00000573153 FAM96AQ9H5X1 160 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 PIH1D1Q9NWS0 290 aaKnown RBP16.94■□□□□ 0.3
SMG6-212ENST00000573153 PSMD13Q9UNM6 376 aa16.94■□□□□ 0.3
SMG6-212ENST00000573153 PIKFYVEQ9Y2I7 2098 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 MROH6A6NGR9 719 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 TOX3O15405 576 aaPredicted RBP16.93■□□□□ 0.3
SMG6-212ENST00000573153 RAD1O60671 282 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 SUN1O94901 812 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 MTHFD1P11586 935 aaKnown RBP16.93■□□□□ 0.3
SMG6-212ENST00000573153 LIFP15018 202 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 ZNF28P17035 718 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 TPH1P17752 444 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 SH3BP2P78314 561 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 LONRF2Q1L5Z9 754 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 TMEM164Q5U3C3 297 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 CAPRIN2Q6IMN6 1127 aaKnown RBP16.93■□□□□ 0.3
SMG6-212ENST00000573153 SNX20Q7Z614 316 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 LINC00523Q86TU6 105 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 PLXDC1Q8IUK5 500 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 TRIM58Q8NG06 486 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 ULK4Q96C45 1275 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 LZTFL1Q9NQ48 299 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 NLE1Q9NVX2 485 aaPredicted RBP16.93■□□□□ 0.3
SMG6-212ENST00000573153 ZKSCAN5Q9Y2L8 839 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 COL6A6A6NMZ7 2263 aa16.93■□□□□ 0.3
SMG6-212ENST00000573153 ZNF462Q96JM2 2506 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TERTO14746 1132 aaKnown RBP16.92■□□□□ 0.3
SMG6-212ENST00000573153 MSH3P20585 1137 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 MC4RP32245 332 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 FDFT1P37268 417 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 GRIA1P42261 906 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 CYP4F2P78329 520 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 CCNG2Q16589 344 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 GPR33Q49SQ1 333 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 MANEAQ5SRI9 462 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 DCAF12Q5T6F0 453 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TRIM48Q8IWZ4 208 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TAB3Q8N5C8 712 aaPredicted RBP16.92■□□□□ 0.3
SMG6-212ENST00000573153 CDKN2AIPNLQ96HQ2 116 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TGM7Q96PF1 710 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TEFMQ96QE5 360 aaKnown RBP16.92■□□□□ 0.3
SMG6-212ENST00000573153 NRTNQ99748 197 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 ASPSCR1Q9BZE9 553 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 WWP1Q9H0M0 922 aa16.92■□□□□ 0.3
SMG6-212ENST00000573153 CFAP20Q9Y6A4 193 aaKnown RBP16.92■□□□□ 0.3
SMG6-212ENST00000573153 GCN1Q92616 2671 aaKnown RBP16.91■□□□□ 0.3
SMG6-212ENST00000573153 LOC101059948A0A1B0GTJ6 334 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 NRDCO43847 1150 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 ETS1P14921 441 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 ITGB6P18564 788 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 ITGALP20701 1170 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 ACRV1P26436 265 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 PBLDP30039 288 aaPredicted RBP16.91■□□□□ 0.3
SMG6-212ENST00000573153 AKT1P31749 480 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 FOXN2P32314 431 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 POU6F1Q14863 301 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 STYXQ8WUJ0 223 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 C1orf54Q8WWF1 131 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 CXorf40BQ96DE9 158 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 SLC41A2Q96JW4 573 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 OR52A5Q9H2C5 316 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 ETNK1Q9HBU6 452 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 DRG1Q9Y295 367 aaKnown RBP16.91■□□□□ 0.3
SMG6-212ENST00000573153 PPP2R2CQ9Y2T4 447 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms