RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DSC2Q02487 901 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF169Q14929 603 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ANKRD20A8PQ5CZ79 823 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ALS2CLQ60I27 953 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 B3GNTL1Q67FW5 361 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ZNF324BQ6AW86 544 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 DCUN1D2Q6PH85 259 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 TMEM151BQ8IW70 566 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ATPAF2Q8N5M1 289 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 GPR26Q8NDV2 337 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 LPCAT1Q8NF37 534 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 NSMCE1Q8WV22 266 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 GLYATL1Q969I3 302 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 AGAP3Q96P47 875 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 TUBGCP2Q9BSJ2 902 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 DHRS4Q9BTZ2 278 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 GANQ9H2C0 597 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 OLAHQ9NV23 265 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 SOHLH2Q9NX45 425 aa10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 PTRH2Q9Y3E5 179 aaKnown RBP10.16□□□□□ -0.78
CTDNEP1-202ENST00000570380 SLC9B1P1A6NJY1 282 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 TMEM150CB9EJG8 249 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 C19orf84I3L1E1 186 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 PCDH17O14917 1159 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 KCNN4O15554 427 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 VEGFDO43915 354 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 CDK14O94921 469 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 CYP2A7P20853 494 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 AGXTP21549 392 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 PSMA2P25787 234 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 MIPP30301 263 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 SOX5P35711 763 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 HALP42357 657 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 ARCN1P48444 511 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 TDGF1P3P51864 188 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 JAM2P57087 298 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 FOXL2P58012 376 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 RPL26P61254 145 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 QPCTQ16769 361 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 HSP90AA4PQ58FG1 418 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 MLIPQ5VWP3 458 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 FCRL6Q6DN72 434 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 ALG1LQ6GMV1 187 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 FAM180AQ6UWF9 173 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 TMCO3Q6UWJ1 677 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 PPP1R32Q7Z5V6 425 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 CCHCR1Q8TD31 782 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 COG1Q8WTW3 980 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 HDAC11Q96DB2 347 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 CNDP1Q96KN2 507 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 GBP5Q96PP8 586 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 NUP85Q9BW27 656 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 POLR1EQ9GZS1 481 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 FANCEQ9HB96 536 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 PCDH9Q9HC56 1237 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 SUCOQ9UBS9 1254 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 PSMD13Q9UNM6 376 aa10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 RPL26L1Q9UNX3 145 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-202ENST00000570380 ACANP16112 2415 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 TRGV8A0A0C4DH27 118 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ANKRD66B4E2M5 251 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CCL21O00585 134 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZNF749O43361 778 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CNOT3O75175 753 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 SNRNP200O75643 2136 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CBSLP0DN79 551 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CD1EP15812 388 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 DESP17661 470 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CBSP35520 551 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 FOLR3P41439 243 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZNF135P52742 658 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ADCY2Q08462 1091 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 NIPAL4Q0D2K0 466 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 AIMP2Q13155 320 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 B4GALNT4Q76KP1 1039 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 OOSP2Q86WS3 158 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 PSTKQ8IV42 348 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CARFQ8N187 725 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 TRAM1L1Q8N609 369 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 BCORP1Q8N888 145 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ARRDC2Q8TBH0 407 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 C14orf79Q96F83 325 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZSCAN5AQ9BUG6 496 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 SLC7A5P2Q9GIP4 190 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 ZWILCHQ9H900 591 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 SYTL2Q9HCH5 934 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 NLRC4Q9NPP4 1024 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 TMPRSS11EQ9UL52 423 aa10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 CFAP20Q9Y6A4 193 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-202ENST00000570380 OR6C74A6NCV1 312 aa10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 H3BRJ5 948 aa10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 EPHB6O15197 1021 aa10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 ALOX12BO75342 701 aa10.13□□□□□ -0.79
CTDNEP1-202ENST00000570380 UMODP07911 640 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms