RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 OR52A4PA6NMU1 304 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 QSOX1O00391 747 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 PLD2O14939 933 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 TLX3O43711 291 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 AP2A2O94973 939 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 TERF1P54274 439 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 ERVPABLB-1P60509 514 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CFHR1Q03591 330 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 TRA2AQ13595 282 aaKnown RBP eCLIP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 WDR74Q6RFH5 385 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CERS6Q6ZMG9 384 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 MICALCLQ6ZW33 695 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF534Q76KX8 674 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CFAP206Q8IYR0 622 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CPT1BQ92523 772 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CMKLR1Q99788 373 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CCM2Q9BSQ5 444 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 TBC1D10AQ9BXI6 508 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 THSD1Q9NS62 852 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 KCND1Q9NSA2 647 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 AKAP7Q9P0M2 348 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 PSMD13Q9UNM6 376 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
HERPUD1-218ENST00000569569 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 TNFSF15O95150 251 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 GSTM1P09488 218 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 JMJD7P0C870 316 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 MLNP12872 115 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 MGAT1P26572 445 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 CSF2RBP32927 897 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 CRADDP78560 199 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 GSTM4Q03013 218 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 RPE65Q16518 533 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 ARMC3Q5W041 872 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 CREG2Q8IUH2 290 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 MCUQ8NE86 351 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 SNIP1Q8TAD8 396 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 NCSTNQ92542 709 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 WWP1Q9H0M0 922 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 TREX1Q9NSU2 369 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 SYBUQ9NX95 663 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 FAM8A1Q9UBU6 413 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 PCYOX1Q9UHG3 505 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 LOXL2Q9Y4K0 774 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 LAMA5O15230 3695 aa13.53□□□□□ -0.24
HERPUD1-218ENST00000569569 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.24
HERPUD1-218ENST00000569569 PRAMEF33A0A0G2JMD5 474 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 CDRT15L2A8MXV6 281 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 F8W8V4 182 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 UBXN7O94888 489 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 POLBP06746 335 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ITGA2BP08514 1039 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 THRAP10827 490 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 AMD1P17707 334 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 NMBRP28336 390 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 EIF2S3P41091 472 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 PAFAH1B1P43034 410 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 MAPK9P45984 424 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 GPR18Q14330 331 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ANKRD22Q5VYY1 191 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ZNF449Q6P9G9 518 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 XKR5Q6UX68 686 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 CAND1Q86VP6 1230 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 RCBTB1Q8NDN9 531 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ZFPM2Q8WW38 1151 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 SLCO2A1Q92959 643 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 C12orf66Q96MD2 445 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 INSM2Q96T92 566 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 SOX13Q9UN79 622 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 PRSS21Q9Y6M0 314 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ZZEF1O43149 2961 aa13.52□□□□□ -0.25
HERPUD1-218ENST00000569569 ZFHX4Q86UP3 3567 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms