RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ICAM3P32942 547 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 GARSP41250 739 aaKnown RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CLK1P49759 484 aaKnown RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CCL23P55773 120 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ADORA2A-AS1P86434 159 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CYP4A11Q02928 519 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 DSC1Q08554 894 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 TFCP2Q12800 502 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 EPS8Q12929 822 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CAMK1Q14012 370 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZNF667Q5HYK9 610 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMEM31Q5JXX7 168 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 NAA35Q5VZE5 725 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 NAA16Q6N069 864 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 C8orf82Q6P1X6 216 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL20RBQ6UXL0 311 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 DENND5BQ6ZUT9 1274 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 PATL1Q86TB9 770 aaKnown RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 FJX1Q86VR8 437 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CEP97Q8IW35 865 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 NDUFAF2Q8N183 169 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 C17orf53Q8N3J3 647 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CPXM2Q8N436 756 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 WDTC1Q8N5D0 677 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 OR14A16Q8NHC5 309 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 LMO3Q8TAP4 145 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ETNPPLQ8TBG4 499 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 SNX21Q969T3 373 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 SH3KBP1Q96B97 665 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 RNF183Q96D59 192 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 FEM1CQ96JP0 617 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CDHR1Q96JP9 859 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 NR1H4Q96RI1 486 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 C1QTNF1Q9BXJ1 281 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 MOV10L1Q9BXT6 1211 aaKnown RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 RANBP17Q9H2T7 1088 aaKnown RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 RPAP3Q9H6T3 665 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 WDR26Q9H7D7 661 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZWILCHQ9H900 591 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CD93Q9NPY3 652 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 SELENONQ9NZV5 590 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 HMG20BQ9P0W2 317 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CHORDC1Q9UHD1 332 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 CORO1CQ9ULV4 474 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 SUFUQ9UMX1 484 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 SALL1Q9NSC2 1324 aa3.39□□□□□ -1.87
HMGB1P6-201ENST00000569046 ATG2AQ2TAZ0 1938 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 A0A1B0GUL7 405 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 LINC01553A4QN01 128 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SRRM3A6NNA2 597 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 EBAG9O00559 213 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MPHOSPH10O00566 681 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SH2B2O14492 632 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 ADAM20O43506 726 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TGDSO95455 350 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TIMP1P01033 207 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 PRSS2P07478 247 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 ASNSP08243 561 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SRD5A1P18405 259 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 EDN2P20800 178 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 RYKP34925 604 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MXI1P50539 228 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 CLCN5P51795 746 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 ACLYP53396 1101 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 BEX3Q00994 111 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 PPARDQ03181 441 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBL3Q12788 808 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 KIF5AQ12840 1032 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 GRSF1Q12849 480 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 GRB14Q14449 540 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMEM266Q2M3C6 531 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 NADSYN1Q6IA69 706 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 NCAPH2Q6IBW4 605 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 PRSS57Q6UWY2 283 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMCO2Q7Z6W1 182 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 ADGRG6Q86SQ4 1221 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 IQCA1Q86XH1 822 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 LURAP1LQ8IV03 231 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 DENND6AQ8IWF6 608 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MB21D2Q8IYB1 491 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TAGAPQ8N103 731 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SCML4Q8N228 414 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 PLD5Q8N7P1 536 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 Q8NFD4 153 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MGARPQ8TDB4 240 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 AFAP1L1Q8TED9 768 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMED6Q8WW62 240 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 CD180Q99467 661 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 MEIS3Q99687 375 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLC25A33Q9BSK2 321 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 INTS2Q9H0H0 1204 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms