RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 INPP5DQ92835 1189 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 HDAC11Q96DB2 347 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 TRIM11Q96F44 468 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 IMP4Q96G21 291 aaKnown RBP14.5□□□□□ -0.09
USB1-214ENST00000568848 ADGRE3Q9BY15 652 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 ZBTB20Q9HC78 741 aaPredicted RBP14.5□□□□□ -0.09
USB1-214ENST00000568848 WASH6PQ9NQA3 447 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 HRASLS2Q9NWW9 162 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 SOHLH2Q9NX45 425 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 SEMA5BQ9P283 1151 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 SNX7Q9UNH6 387 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 NTNG1Q9Y2I2 539 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 SEC16AO15027 2179 aa14.5□□□□□ -0.09
USB1-214ENST00000568848 SLC9B1P1A6NJY1 282 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 CEACAM4O75871 244 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 PRF1P14222 555 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 PVRP15151 417 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 POLR2CP19387 275 aaPredicted RBP14.49□□□□□ -0.09
USB1-214ENST00000568848 DYNLT1P63172 113 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 ACY1Q03154 408 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 NFKBIBQ15653 356 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 ZFYVE27Q5T4F4 411 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 TMEM220Q6QAJ8 160 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 LRRC49Q8IUZ0 686 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 D2HGDHQ8N465 521 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 OR1L3Q8NH93 324 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 CPLX3Q8WVH0 158 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 FAF2Q96CS3 445 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 ZNF670Q9BS34 389 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 GPR87Q9BY21 358 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 IL26Q9NPH9 171 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 CSMD2Q7Z408 3487 aa14.49□□□□□ -0.09
USB1-214ENST00000568848 ENO4A6NNW6 628 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 MEN1O00255 615 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 VEGFDO43915 354 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 ALOX12BO75342 701 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 CTSBP07858 339 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 MTHFD1P11586 935 aaKnown RBP14.48□□□□□ -0.09
USB1-214ENST00000568848 POU3F2P20265 443 aaPredicted RBP14.48□□□□□ -0.09
USB1-214ENST00000568848 CES1P23141 567 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 OTX2P32243 289 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 HALP42357 657 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 LMAN1P49257 510 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 TUBB4BP68371 445 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 IFI35P80217 286 aaPredicted RBP14.48□□□□□ -0.09
USB1-214ENST00000568848 CDK18Q07002 472 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 PPIDQ08752 370 aaKnown RBP14.48□□□□□ -0.09
USB1-214ENST00000568848 XRCC4Q13426 336 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 TUBB2AQ13885 445 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 ZNF789Q5FWF6 425 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 C1QL3Q5VWW1 255 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 WASH2PQ6VEQ5 465 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 DAAM2Q86T65 1068 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 AMZ2Q86W34 360 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 CLIP3Q96DZ5 547 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 TUBB2BQ9BVA1 445 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 RAB33BQ9H082 229 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 KCND1Q9NSA2 647 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 PCMTD2Q9NV79 361 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
USB1-214ENST00000568848 TCFL5Q9UL49 500 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 ZNF451Q9Y4E5 1061 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 CSAG2Q9Y5P2 127 aa14.48□□□□□ -0.09
USB1-214ENST00000568848 SVILO95425 2214 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 POLQO75417 2590 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 TLCD2A6NGC4 264 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 MYO1FO00160 1098 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 GAPDHSO14556 408 aaPredicted RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 CBX6O95503 412 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 RECKO95980 971 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 LPOP22079 712 aaPredicted RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 TNFRSF8P28908 595 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 RORAP35398 523 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 HSD11B2P80365 405 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 GTF2H3Q13889 308 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 SLC9A5Q14940 896 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 HADHQ16836 314 aaKnown RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 FNBP1LQ5T0N5 605 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 GPRC6AQ5T6X5 926 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 ZNF517Q6ZMY9 492 aaPredicted RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 RAVER1Q8IY67 606 aaKnown RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 DSELQ8IZU8 1212 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 FATE1Q969F0 183 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 TADA1Q96BN2 335 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 C12orf66Q96MD2 445 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 RNF157Q96PX1 679 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 DEF6Q9H4E7 631 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 MAGEE1Q9HCI5 957 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 GPR83Q9NYM4 423 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 NFKBIL1Q9UBC1 381 aaPredicted RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 SAE1Q9UBE0 346 aaPredicted RBP14.47□□□□□ -0.09
USB1-214ENST00000568848 AMACRQ9UHK6 382 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 HYOU1Q9Y4L1 999 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 OTOGQ6ZRI0 2925 aa14.47□□□□□ -0.09
USB1-214ENST00000568848 LRRD1A4D1F6 860 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 WIPF3A6NGB9 483 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 GPR89AB7ZAQ6 455 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 TMEM150CB9EJG8 249 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 HCRTR1O43613 425 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms