RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CCM2Q9BSQ5 444 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 GNPTGQ9UJJ9 305 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 VPS9D1Q9Y2B5 631 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 GOLGA4Q13439 2230 aaKnown RBP17.66■□□□□ 0.42
COMMD4-222ENST00000568034 C17orf113A0A1B0GUU1 675 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 SLC30A4O14863 429 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PFDN6O15212 129 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 KCNJ13O60928 360 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 NIPSNAP2O75323 286 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 ACSL3O95573 720 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 FTH1P02794 183 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 GSTM1P09488 218 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PKMP14618 531 aaKnown RBP17.66■□□□□ 0.42
COMMD4-222ENST00000568034 BRAFP15056 766 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 ITGB6P18564 788 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 CCR7P32248 378 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 STX2P32856 288 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 GSTM4Q03013 218 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PROX2Q3B8N5 592 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 KBTBD12Q3ZCT8 623 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 METRNLQ641Q3 311 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PTRHD1Q6GMV3 140 aaKnown RBP17.66■□□□□ 0.42
COMMD4-222ENST00000568034 SLC26A11Q86WA9 606 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 SPNS2Q8IVW8 549 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 NAGSQ8N159 534 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 FAM181AQ8N9Y4 354 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 FAM46DQ8NEK8 389 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 GPR156Q8NFN8 814 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PATE1Q8WXA2 126 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 AARSD1Q9BTE6 412 aaKnown RBP17.66■□□□□ 0.42
COMMD4-222ENST00000568034 DUSP23Q9BVJ7 150 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PARD6BQ9BYG5 372 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 COG4Q9H9E3 785 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 PRDM8Q9NQV8 689 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 SCHIP1Q9P0W5 487 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-222ENST00000568034 RABGEF1Q9UJ41 708 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 RAB21Q9UL25 225 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 WDR37Q9Y2I8 494 aa17.66■□□□□ 0.42
COMMD4-222ENST00000568034 KLHL33A6NCF5 533 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 MYF5P13349 255 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 CD151P48509 253 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 PMS2P54278 862 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 INAVAQ3KP66 663 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 RBM20Q5T481 1227 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 ZCCHC8Q6NZY4 707 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 WASH2PQ6VEQ5 465 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 NAPRTQ6XQN6 538 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 TRMT10CQ7L0Y3 403 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 ZC3HC1Q86WB0 502 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 SLC35F3Q8IY50 421 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 KYQ8NBH2 561 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 GABPB2Q8TAK5 448 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 AENQ8WTP8 325 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 SETD7Q8WTS6 366 aaKnown RBP17.65■□□□□ 0.42
COMMD4-222ENST00000568034 ZDHHC1Q8WTX9 485 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 CDKL2Q92772 493 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 NDNQ99608 321 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 OSGEPL1Q9H4B0 414 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 WASH6PQ9NQA3 447 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 GALPQ9UBC7 116 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 FAM8A1Q9UBU6 413 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 DOLKQ9UPQ8 538 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 CDYLQ9Y232 598 aa17.65■□□□□ 0.42
COMMD4-222ENST00000568034 SLC5A10A0PJK1 596 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 B4DGG1 531 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 H3BMM5 538 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 RIPK2O43353 540 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 SNX2O60749 519 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 TRIM16O95361 564 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ABHD2P08910 425 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ALPPL2P10696 532 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 VCLP18206 1134 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 AOAHP28039 575 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
COMMD4-222ENST00000568034 AGAP9Q5VTM2 703 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ABRAXAS1Q6UWZ7 409 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 STRA8Q7Z7C7 330 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 CFAP206Q8IYR0 622 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ARL10Q8N8L6 244 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ACVR1CQ8NER5 493 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 GIMAP7Q8NHV1 300 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 RHBDD1Q8TEB9 315 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ELMO1Q92556 727 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 KCNJ9Q92806 393 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 APOLD1Q96LR9 279 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 SLC30A3Q99726 388 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 OR52A5Q9H2C5 316 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 DPEP2Q9H4A9 486 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 ACSS3Q9H6R3 686 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 NSMCE4AQ9NXX6 385 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 SIRPGQ9P1W8 387 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 DMXL1Q9Y485 3027 aa17.64■□□□□ 0.41
COMMD4-222ENST00000568034 F8W8V4 182 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 GPC4O75487 556 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 F3P13726 295 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 IDSP22304 550 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 RPL10P27635 214 aaKnown RBP17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PDHA2P29803 388 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms