RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SNX20Q7Z614 316 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 LINC00523Q86TU6 105 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 BEND7Q8N7W2 519 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 BMPERQ8N8U9 685 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 OR13C4Q8NGS5 318 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 OR2L2Q8NH16 312 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 HEXDCQ8WVB3 486 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZFPM2Q8WW38 1151 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 NKD1Q969G9 470 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ULK4Q96C45 1275 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TRIM44Q96DX7 344 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 RTP4Q96DX8 246 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZDHHC12Q96GR4 267 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 C9orf72Q96LT7 481 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ALS2CR12Q96Q35 445 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TEFMQ96QE5 360 aaKnown RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZPBPQ9BS86 351 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 FRMD8P1Q9BZ68 369 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 FAM96AQ9H5X1 160 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 NLE1Q9NVX2 485 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 CRLS1Q9UJA2 301 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ACSL5Q9ULC5 683 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 PSMD13Q9UNM6 376 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF148Q9UQR1 794 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 WDR37Q9Y2I8 494 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 MED13Q9UHV7 2174 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 HELZ2Q9BYK8 2649 aaKnown RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TLN1Q9Y490 2541 aaKnown RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ERI2A8K979 691 aaKnown RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 H7C0S8 307 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CCL22O00626 93 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 POLR1CO15160 346 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 AP2A1O95782 977 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 GAS8O95995 478 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 PRB1P04280 392 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 POLBP06746 335 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CCDC175P0C221 793 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ANKRD34CP0C6C1 535 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ATP1B2P14415 290 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ITGALP20701 1170 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 FDFT1P37268 417 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 LEPRP48357 1165 aaKnown RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ARSDP51689 593 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 GDF10P55107 478 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 SNX1Q13596 522 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 LAMB3Q13751 1172 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 SEPT6Q14141 434 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 NFE2L1Q14494 772 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 POU6F1Q14863 301 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 SKIDA1Q1XH10 827 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 BCL7AQ4VC05 210 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ZRANB3Q5FWF4 1079 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CACHD1Q5VU97 1274 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 KIAA1614Q5VZ46 1190 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ANKS6Q68DC2 871 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 KLHL35Q6PF15 583 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ZNF662Q6ZS27 426 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 TAS2R42Q7RTR8 314 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 VASH2Q86V25 355 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 SLC13A5Q86YT5 568 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 LRRC8AQ8IWT6 810 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CFAP206Q8IYR0 622 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CACNA2D3Q8IZS8 1091 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 NXPE1Q8N323 547 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 TAB3Q8N5C8 712 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 IL22RA1Q8N6P7 574 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 STYXQ8WUJ0 223 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 C1orf54Q8WWF1 131 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ATG4AQ8WYN0 398 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 TTC9Q92623 222 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 PMEPA1Q969W9 287 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CDKN2AIPNLQ96HQ2 116 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 DNAJC1Q96KC8 554 aaKnown RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 LINC00615Q96LM1 132 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 TGM7Q96PF1 710 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 INSM2Q96T92 566 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-209ENST00000567635 COPS8Q99627 209 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CTRCQ99895 268 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 CCM2Q9BSQ5 444 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 SPRY4Q9C004 299 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 RAB33BQ9H082 229 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 WWP1Q9H0M0 922 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ETNK1Q9HBU6 452 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 LZTFL1Q9NQ48 299 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 ZDHHC3Q9NYG2 299 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 EPHA6Q9UF33 1036 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 PILRAQ9UKJ1 303 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 COLEC10Q9Y6Z7 277 aa6.77□□□□□ -1.33
SF3B3-209ENST00000567635 MN1Q10571 1320 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-209ENST00000567635 ATMQ13315 3056 aa6.76□□□□□ -1.33
SF3B3-209ENST00000567635 IGLV3-16A0A075B6K0 115 aa6.76□□□□□ -1.33
SF3B3-209ENST00000567635 TRBV5-4A0A0C4DH59 114 aa6.76□□□□□ -1.33
SF3B3-209ENST00000567635 C17orf113A0A1B0GUU1 675 aa6.76□□□□□ -1.33
SF3B3-209ENST00000567635 MROH6A6NGR9 719 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms