RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 USP53Q70EK8 1073 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 PIM3Q86V86 326 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 AGGF1Q8N302 714 aaeCLIP21.2■□□□□ 0.98
NME3-210ENST00000567271 LILRA3Q8N6C8 439 aaPredicted RBP21.2■□□□□ 0.98
NME3-210ENST00000567271 SIGLEC10Q96LC7 697 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 TRIM51Q9BSJ1 452 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 RDH14Q9HBH5 336 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 SLC40A1Q9NP59 571 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 FAM8A1Q9UBU6 413 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 IGF2RP11717 2491 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 PRAMEF33A0A0G2JMD5 474 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 TMEM8BA6NDV4 472 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 TMX2-CTNND1H3BSU7 103 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 QSOX1O00391 747 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 GSTM1P09488 218 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 ARCN1P48444 511 aaKnown RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 EPHA4P54764 986 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 INHBCP55103 352 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 GSTM4Q03013 218 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 ZFP36L1Q07352 338 aaKnown RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 ANKRD20A4Q4UJ75 823 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 KIAA0930Q6ICG6 404 aaPredicted RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 TMEM26Q6ZUK4 368 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 LDB1Q86U70 411 aaPredicted RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 TMEM135Q86UB9 458 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 SLITRK4Q8IW52 837 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 RBM12BQ8IXT5 1001 aaKnown RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 KDF1Q8NAX2 398 aaPredicted RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 OR10G6Q8NH81 332 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 CXorf40BQ96DE9 158 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 NXPE2Q96DL1 559 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 TMEM74Q96NL1 305 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 FCRL3Q96P31 734 aaPredicted RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 NUDT22Q9BRQ3 303 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 TRIM56Q9BRZ2 755 aaKnown RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 FOXP3Q9BZS1 431 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 WWP1Q9H0M0 922 aa21.19■□□□□ 0.98
NME3-210ENST00000567271 CCDC86Q9H6F5 360 aaKnown RBP21.19■□□□□ 0.98
NME3-210ENST00000567271 LILRA5A6NI73 299 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 POLBP06746 335 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 OR56A5P0C7T3 313 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 CCKBRP32239 447 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 TTPAP49638 278 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 CFHR1Q03591 330 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 CYP4F3Q08477 520 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 MAP9Q49MG5 647 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 ZNF574Q6ZN55 896 aaPredicted RBP21.18■□□□□ 0.98
NME3-210ENST00000567271 MDM1Q8TC05 714 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 AHCYL2Q96HN2 611 aaKnown RBP21.18■□□□□ 0.98
NME3-210ENST00000567271 INSM2Q96T92 566 aaPredicted RBP21.18■□□□□ 0.98
NME3-210ENST00000567271 TBC1D10AQ9BXI6 508 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 COG4Q9H9E3 785 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 DKK4Q9UBT3 224 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 FREM2Q5SZK8 3169 aa21.18■□□□□ 0.98
NME3-210ENST00000567271 A0A1W2PNU3 283 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 GOLGA8KD6RF30 607 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 GOLGA8TH3BQL2 631 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 FTH1P02794 183 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 SLC35G4P0C7Q5 338 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 HOXB3P14651 431 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 PAMP19021 973 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 MORF4L2Q15014 288 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 CAPRIN2Q6IMN6 1127 aaKnown RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 HIBCHQ6NVY1 386 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 SPDYE1Q8NFV5 336 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 ZNF669Q96BR6 464 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 TRIM44Q96DX7 344 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 LIN37Q96GY3 246 aaPredicted RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 DPYSL5Q9BPU6 564 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 STRADBQ9C0K7 418 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 SEMA6CQ9H3T2 930 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 EPB41L5Q9HCM4 733 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 IMP3Q9NV31 184 aaKnown RBP21.17■□□□□ 0.98
NME3-210ENST00000567271 MAD1L1Q9Y6D9 718 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 AK5Q9Y6K8 562 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 RPS6KL1Q9Y6S9 549 aa21.17■□□□□ 0.98
NME3-210ENST00000567271 CCDC187A0A096LP49 1063 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 ZCWPW2A0A1B0GU75 182 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 F8W8V4 182 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 SMAPO00193 183 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 DUX1O43812 170 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 USP1O94782 785 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 SEC31AO94979 1220 aaKnown RBP21.16■□□□□ 0.98
NME3-210ENST00000567271 MPOP05164 745 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 MTHFD1P11586 935 aaKnown RBP21.16■□□□□ 0.98
NME3-210ENST00000567271 CSF2RBP32927 897 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 LSSP48449 732 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 C2orf54Q08AI8 447 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 RPA4Q13156 261 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 GPR18Q14330 331 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 MRNIPQ6NTE8 343 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 TMEM71Q6P5X7 295 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 ZNF572Q7Z3I7 529 aaPredicted RBP21.16■□□□□ 0.98
NME3-210ENST00000567271 SDCCAG8Q86SQ7 713 aaPredicted RBP21.16■□□□□ 0.98
NME3-210ENST00000567271 OR4D9Q8NGE8 314 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 GPR150Q8NGU9 434 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 WDR36Q8NI36 951 aaKnown RBP21.16■□□□□ 0.98
NME3-210ENST00000567271 SNF8Q96H20 258 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 RMDN2Q96LZ7 410 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 C12orf66Q96MD2 445 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms