RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SYCE1LA8MT33 242 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 H0Y8X5 98 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 SGTAO43765 313 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 THEGLP0DJG4 465 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 CCR7P32248 378 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 HSPA14Q0VDF9 509 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 SP140Q13342 867 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 ACAP2Q15057 778 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 TEAD4Q15561 434 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 HHATQ5VTY9 493 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PMS2CLQ68D20 193 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 ENPP7Q6UWV6 458 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 NEK10Q6ZWH5 1172 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 FRA10AC1Q70Z53 315 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 CEP68Q76N32 757 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 ADAMTSL2Q86TH1 951 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 AMZ2Q86W34 360 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PARGQ86W56 976 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
CLK3-214ENST00000564096 BEND7Q8N7W2 519 aaPredicted RBP12.6□□□□□ -0.39
CLK3-214ENST00000564096 MFSD2AQ8NA29 543 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 OR2L2Q8NH16 312 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 RDH11Q8TC12 318 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 SKA2Q8WVK7 121 aaPredicted RBP12.6□□□□□ -0.39
CLK3-214ENST00000564096 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 BMFQ96LC9 184 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 UBXN10Q96LJ8 280 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 FOPNLQ96NB1 174 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 FAM111AQ96PZ2 611 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 CARS2Q9HA77 564 aaKnown RBP12.6□□□□□ -0.39
CLK3-214ENST00000564096 IGSF5Q9NSI5 407 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 ZSCAN32Q9NX65 697 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 ZNHIT2Q9UHR6 403 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
CLK3-214ENST00000564096 SUFUQ9UMX1 484 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PLLPQ9Y342 182 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 LRRK1Q38SD2 2015 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 TRPM6Q9BX84 2022 aa12.6□□□□□ -0.39
CLK3-214ENST00000564096 PLXNB3Q9ULL4 1909 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 BTN3A1O00481 513 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 LILRB5O75023 590 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 POP7O75817 140 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 RASGRP1O95267 797 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 CEACAM5P06731 702 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 MPC1LP0DKB6 136 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 GNSP15586 552 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 CD1DP15813 335 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 CREB1P16220 341 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TFEBP19484 476 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TAC1P20366 129 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 CD38P28907 300 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 AVPR2P30518 371 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 RPA3P35244 121 aaPredicted RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 GNPDA1P46926 289 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 BLKP51451 505 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TIAL1Q01085 375 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■■■ 33.6
CLK3-214ENST00000564096 IL9RQ01113 521 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 RPA4Q13156 261 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 ARMCX6Q7L4S7 300 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 RABEPKQ7Z6M1 372 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 ZNF547Q8IVP9 402 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 OR13H1Q8NG92 308 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 NAT14Q8WUY8 206 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 PDLIM5Q96HC4 596 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 MRPL57Q9BQC6 102 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 C1QTNF1Q9BXJ1 281 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 DPEP2Q9H4A9 486 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 EBF2Q9HAK2 575 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 FGF22Q9HCT0 170 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 INTS9Q9NV88 658 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 FAM8A1Q9UBU6 413 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 RUVBL2Q9Y230 463 aaKnown RBP12.59□□□□□ -0.39
CLK3-214ENST00000564096 PCDHGA2Q9Y5H1 932 aa12.59□□□□□ -0.39
CLK3-214ENST00000564096 NPEPPSL1A6NEC2 478 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 H3BM21 787 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PLIN3O60664 434 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 KERAO60938 352 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 S100BP04271 92 aaPredicted RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 C8GP07360 202 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ENO2P09104 434 aaPredicted RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 SLC35G4P0C7Q5 338 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ACP5P13686 325 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 CHN1P15882 459 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 GLRBP48167 497 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 DHPSP49366 369 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms