RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TPBGLP0DKB5 382 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 PBLDP30039 288 aaPredicted RBP21.58■■□□□ 1.05
LINC01960-201ENST00000563759 KCNC1P48547 511 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 PLEKHS1Q5SXH7 462 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 GKAP1Q5VSY0 366 aaPredicted RBP21.58■■□□□ 1.05
LINC01960-201ENST00000563759 SKA2Q8WVK7 121 aaPredicted RBP21.58■■□□□ 1.05
LINC01960-201ENST00000563759 ASZ1Q8WWH4 475 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 PHF21BQ96EK2 531 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 CCM2Q9BSQ5 444 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 TEX101Q9BY14 249 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 PHPT1Q9NRX4 125 aaPredicted RBP21.58■■□□□ 1.05
LINC01960-201ENST00000563759 THAP1Q9NVV9 213 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 VCANP13611 3396 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 EIF3FO00303 357 aaPredicted RBP21.58■■□□□ 1.04
LINC01960-201ENST00000563759 IGLV3-19P01714 112 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 GFAPP14136 432 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 ZNF8P17098 575 aaPredicted RBP21.58■■□□□ 1.04
LINC01960-201ENST00000563759 IGFALSP35858 605 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 SLC1A6P48664 564 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 BCL7AQ4VC05 210 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 CRTC3Q6UUV7 619 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 ASB12Q8WXK4 309 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 ASB2Q96Q27 587 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 ELAC2Q9BQ52 826 aaKnown RBP21.58■■□□□ 1.04
LINC01960-201ENST00000563759 LGR4Q9BXB1 951 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 CHRDQ9H2X0 955 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 NCKIPSDQ9NZQ3 722 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 TMEM98Q9Y2Y6 226 aa21.58■■□□□ 1.04
LINC01960-201ENST00000563759 SNNO75324 88 aaPredicted RBP21.57■■□□□ 1.04
LINC01960-201ENST00000563759 TRIM23P36406 574 aa21.57■■□□□ 1.04
LINC01960-201ENST00000563759 NAGLUP54802 743 aa21.57■■□□□ 1.04
LINC01960-201ENST00000563759 OCRLQ01968 901 aa21.57■■□□□ 1.04
LINC01960-201ENST00000563759 SF3A3Q12874 501 aaKnown RBP eCLIP21.57■■□□□ 1.04
LINC01960-201ENST00000563759 C7orf26Q96N11 449 aa21.57■■□□□ 1.04
LINC01960-201ENST00000563759 GATA5Q9BWX5 397 aaPredicted RBP21.57■■□□□ 1.04
LINC01960-201ENST00000563759 FAM126AQ9BYI3 521 aaPredicted RBP21.57■■□□□ 1.04
LINC01960-201ENST00000563759 TPSD1Q9BZJ3 242 aa21.57■■□□□ 1.04
LINC01960-201ENST00000563759 TMEM202A6NGA9 273 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 MYCLP1P12525 358 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 DNAJB13P59910 316 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 NFKB2Q00653 900 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 CFAP157Q5JU67 520 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 GPSM1Q86YR5 675 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 SPEM1Q8N4L4 309 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 CCNYL1Q8N7R7 359 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 PPP4R1Q8TF05 950 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 TMEM159Q96B96 161 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 GRAMD1AQ96CP6 724 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 TMEM237Q96Q45 408 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 UTP6Q9NYH9 597 aaKnown RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 NCF1BA6NI72 391 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 NCF1CA8MVU1 366 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 TMEM114B3SHH9 223 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 LYPLA1O75608 230 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 NCF1P14598 390 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 ABCE1P61221 599 aaKnown RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 OVGP1Q12889 678 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 GBX1Q14549 363 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 PFKFB4Q16877 469 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 RAB44Q7Z6P3 723 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 DENND6BQ8NEG7 585 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 OR6Y1Q8NGX8 325 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 CLDN23Q96B33 292 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 TOE1Q96GM8 510 aaKnown RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 ZNF395Q9H8N7 513 aaPredicted RBP21.56■■□□□ 1.04
LINC01960-201ENST00000563759 GPR34Q9UPC5 381 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 SIT1Q9Y3P8 196 aa21.56■■□□□ 1.04
LINC01960-201ENST00000563759 ITM2AO43736 263 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 NUAK1O60285 661 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 SNX2O60749 519 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 ZNF217O75362 1048 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 APBB3O95704 486 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 HSPA4LO95757 839 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 TROVE2P10155 538 aaKnown RBP eCLIP21.55■■□□□ 1.04
LINC01960-201ENST00000563759 MTHFD2P13995 350 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 OXTRP30559 389 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 PLA2G4EQ3MJ16 856 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 CGB2Q6NT52 195 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 SBSNQ6UWP8 590 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 SPATA21Q7Z572 469 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 CRLF3Q8IUI8 442 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 VRK3Q8IV63 474 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 FBXO39Q8N4B4 442 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 PTGR2Q8N8N7 351 aaPredicted RBP21.55■■□□□ 1.04
LINC01960-201ENST00000563759 FOXJ1Q92949 421 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 C20orf27Q9GZN8 174 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 ACSS2Q9NR19 701 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 CD274Q9NZQ7 290 aa21.55■■□□□ 1.04
LINC01960-201ENST00000563759 LILRB5O75023 590 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 S100BP04271 92 aaPredicted RBP21.54■■□□□ 1.04
LINC01960-201ENST00000563759 HNRNPA2B1P22626 353 aaKnown RBP21.54■■□□□ 1.04
LINC01960-201ENST00000563759 RPS9P46781 194 aaKnown RBP21.54■■□□□ 1.04
LINC01960-201ENST00000563759 RCN2Q14257 317 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 TGFBIQ15582 683 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 ZNF547Q8IVP9 402 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 GLMNQ92990 594 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 THOC1Q96FV9 657 aaKnown RBP21.54■■□□□ 1.04
LINC01960-201ENST00000563759 NPHS2Q9NP85 383 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 CD320Q9NPF0 282 aa21.54■■□□□ 1.04
LINC01960-201ENST00000563759 ADAMTS6Q9UKP5 1117 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms