RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 DBNLQ9UJU6 430 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 RABGAP1Q9Y3P9 1069 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 A0A1B0GVC2 190 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 TMEM8BA6NDV4 472 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 H7C423 109 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 OGG1O15527 345 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 AGR2O95994 175 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 HIST1H2ABP04908 130 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 EIF2S1P05198 315 aaKnown RBP2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 HMBSP08397 361 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 FRMD6-AS1P0C7T7 363 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 FAM157CP0CG43 387 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 HIST1H2ADP20671 130 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 HOXC13P31276 330 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 BMXP51813 675 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 RPS3AP61247 264 aaKnown RBP2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 PRKAA1Q13131 559 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 TSTQ16762 297 aaKnown RBP2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 MEP1AQ16819 746 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZDHHC20Q5W0Z9 365 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 TPRG1Q6ZUI0 275 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 HIST3H2AQ7L7L0 130 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 LYG1Q8N1E2 194 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 SCML4Q8N228 414 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 ELMOD3Q96FG2 381 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 RTP3Q9BQQ7 232 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 SETD4Q9NVD3 440 aa2.94□□□□□ -1.94
HMGB1P33-201ENST00000563485 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF197O14709 1029 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZFAND5O76080 213 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 RTN3O95197 1032 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 CEACAM8P31997 349 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 CDH11P55287 796 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 MRPS5P82675 430 aaKnown RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 SP3Q02447 781 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 PPARDQ03181 441 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 ACSM2BQ68CK6 577 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 NCEH1Q6PIU2 408 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 HACE1Q8IYU2 909 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 L3MBTL4Q8NA19 623 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 ARHGEF2Q92974 986 aaKnown RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 MOCOSQ96EN8 888 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 GIMAP5Q96F15 307 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 C18orf12Q96KH6 178 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF582Q96NG8 517 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 GAD1Q99259 594 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 CABLES2Q9BTV7 478 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 MCRIP2Q9BUT9 160 aaKnown RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 DENND2DQ9H6A0 471 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 OLFML3Q9NRN5 406 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 PLCXD1Q9NUJ7 323 aa2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 EXOGQ9Y2C4 368 aaKnown RBP2.93□□□□□ -1.94
HMGB1P33-201ENST00000563485 DNM1LO00429 736 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 TMCC2O75069 709 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 CCNDBP1O95273 360 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 ACP2P11117 423 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 TYMPP19971 482 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SNRPD1P62314 119 aaKnown RBP2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 IRX6P78412 446 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 EIF4A2Q14240 407 aaKnown RBP2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 PCGF3Q3KNV8 242 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 FAAP20Q6NZ36 180 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 KLC3Q6P597 504 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 CFAP77Q6ZQR2 320 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 CLEC17AQ6ZS10 378 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SLC16A9Q7RTY1 509 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 CPLX4Q7Z7G2 160 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 GPALPP1Q8IXQ4 340 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 DNAJC22Q8N4W6 341 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF611Q8N823 705 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF383Q8NA42 475 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 MRGPRDQ8TDS7 321 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 GRHL3Q8TE85 626 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 RFFLQ8WZ73 363 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 TBATAQ96M53 351 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 NUDCD1Q96RS6 583 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 IWS1Q96ST2 819 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SEC62Q99442 399 aaKnown RBP2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SYT11Q9BT88 431 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 HGH1Q9BTY7 390 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SLA2Q9H6Q3 261 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 EHD2Q9NZN4 543 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 SLC7A7Q9UM01 511 aa2.92□□□□□ -1.94
HMGB1P33-201ENST00000563485 IGHV4-4A0A075B6R2 117 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 A0A087WW49 117 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 IGLV9-49A0A0B4J1Y8 123 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 IGHV4-61A0A0C4DH41 118 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 SERINC4A6NH21 518 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 SLCO1B7G3V0H7 640 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 SCAMP1O15126 338 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 DCXO43602 365 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GPC4O75487 556 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 IGHV4-59P01825 116 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 RAF1P04049 648 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 H1F0P07305 194 aaKnown RBP2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 NFKBIAP25963 317 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 PSMC4P43686 418 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 SLC6A12P48065 614 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms