RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 TSTD2Q5T7W7 516 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 PDPK2PQ6A1A2 396 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 KIAA0930Q6ICG6 404 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 KIAA1161Q6NSJ0 714 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 LRIG3Q6UXM1 1119 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 DPPA4Q7L190 304 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 GSPT2Q8IYD1 628 aaKnown RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 NRSN1Q8IZ57 195 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 Q8N9G6 341 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 BLOC1S5Q8TDH9 187 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 UBLCP1Q8WVY7 318 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 NAT6Q93015 286 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 TSACCQ96A04 125 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 PWWP2AQ96N64 755 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 GFM1Q96RP9 751 aaKnown RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 CYTH2Q99418 400 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 SLC12A9Q9BXP2 914 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 GPR63Q9BZJ6 419 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 LRRN3Q9H3W5 708 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 CHRAC1Q9NRG0 131 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 TREX1Q9NSU2 369 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 MOCS1Q9NZB8 636 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 NINJ2Q9NZG7 142 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 APPL1Q9UKG1 709 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 CHMP2BQ9UQN3 213 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 PLAAQ9Y263 795 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 ZNF711Q9Y462 761 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-205ENST00000563293 LRP4O75096 1905 aa9.34□□□□□ -0.91
RPAP1-205ENST00000563293 C1orf232A0A0U1RR37 186 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 H7C0S8 307 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 AREL1O15033 823 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 STX7O15400 261 aaKnown RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 PYGLP06737 847 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ANXA6P08133 673 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 JMJD7P0C870 316 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 SFTPCP11686 197 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 CCKBRP32239 447 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 PPARGP37231 505 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 RPIAP49247 311 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 MAPK10P53779 464 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 MGAT5Q09328 741 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 SGCGQ13326 291 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 SEPT6Q14141 434 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 CASP8Q14790 479 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 CRYMQ14894 314 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 RASA2Q15283 850 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 KCTD19Q17RG1 926 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 TMEM52BQ4KMG9 183 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 FAM182AQ5T1J6 154 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 LGSNQ5TDP6 509 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 KIAA0408Q6ZU52 694 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 NLRP8Q86W28 1048 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 IQCKQ8N0W5 287 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 MPP5Q8N3R9 675 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ARL10Q8N8L6 244 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 WDR48Q8TAF3 677 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 CFAP36Q96G28 342 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 RUFY1Q96T51 708 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 TTC1Q99614 292 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 TMEM109Q9BVC6 243 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 SEMA6CQ9H3T2 930 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 PCDH12Q9NPG4 1184 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ZNF71Q9NQZ8 489 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 NLE1Q9NVX2 485 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 PKD2L2Q9NZM6 624 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 NFKBIL1Q9UBC1 381 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 SLC24A2Q9UI40 661 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
RPAP1-205ENST00000563293 ANKRD17O75179 2603 aaKnown RBP9.33□□□□□ -0.92
RPAP1-205ENST00000563293 RP1L1Q8IWN7 2480 aaPredicted RBP9.32□□□□□ -0.92
RPAP1-205ENST00000563293 ZCWPW2A0A1B0GU75 182 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 TCRBV9S1A1TA0A576 114 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 NEMP1O14524 444 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 MAP2K7O14733 419 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 MMP20O60882 483 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 ACSL3O95573 720 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 CCL4P13236 92 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 SSTR1P30872 391 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 ZNF140P52738 457 aaPredicted RBP9.32□□□□□ -0.92
RPAP1-205ENST00000563293 POLE2P56282 527 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 GPX6P59796 221 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 DCDC1P59894 354 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 PRAMEP78395 509 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 IFFO1Q0D2I5 559 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 GPS2Q13227 327 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 KCNAB2Q13303 367 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 EIF3IQ13347 325 aaKnown RBP9.32□□□□□ -0.92
RPAP1-205ENST00000563293 OLIG2Q13516 323 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 THOC5Q13769 683 aaKnown RBP9.32□□□□□ -0.92
RPAP1-205ENST00000563293 SLC29A2Q14542 456 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 FASTKD3Q14CZ7 662 aaKnown RBP9.32□□□□□ -0.92
RPAP1-205ENST00000563293 ALG11Q2TAA5 492 aa9.32□□□□□ -0.92
RPAP1-205ENST00000563293 AARS2Q5JTZ9 985 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms