RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PRDX6P30041 224 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 ASMTP46597 345 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 RGS1Q08116 209 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 RUNX3Q13761 415 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 GSTA3Q16772 222 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 XKR6Q5GH73 641 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 CRTC3Q6UUV7 619 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 NPWQ8N729 165 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 CDYL2Q8N8U2 506 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 RTP3Q9BQQ7 232 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
TCF4-216ENST00000562680 A0A0J9YYE9 177 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 HHLA1C9JL84 531 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TSPAN6O43657 245 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 KERAO60938 352 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 FKBP9O95302 570 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 SEC24AO95486 1093 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TRBC1P01850 177 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 UROSP10746 265 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ATF6P18850 670 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 INPP1P49441 399 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CLCN4P51793 760 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MBTPS1Q14703 1052 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TCEA2Q15560 299 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TEAD4Q15561 434 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 KCTD21Q4G0X4 260 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 WDR45BQ5MNZ6 344 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TRAF7Q6Q0C0 670 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CILP2Q8IUL8 1156 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 DEFB107AQ8IZN7 70 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CENPLQ8N0S6 344 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 TSTD1Q8NFU3 115 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 EME1Q96AY2 570 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 AGAP2Q99490 1192 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 WRAP53Q9BUR4 548 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 WDR26Q9H7D7 661 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MOCS1Q9NZB8 636 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 STX18Q9P2W9 335 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 ENTPD4Q9Y227 616 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 C2orf71A6NGG8 1288 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 EIF3FO00303 357 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 AMD1P17707 334 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ENDOUP21128 410 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 CHI3L1P36222 383 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 WASP42768 502 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 IST1P53990 364 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TOMM20Q15388 145 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 C10orf62Q5T681 223 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 BHLHB9Q6PI77 547 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TMEM220Q6QAJ8 160 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 AHCYL2Q96HN2 611 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 EBF3Q9H4W6 596 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ZNF556Q9HAH1 456 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 SCML1Q9UN30 329 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 LRCH1Q9Y2L9 728 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MTF2Q9Y483 593 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 DICER1Q9UPY3 1922 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 RFPL2O75678 378 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 PIAS1O75925 651 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CLDN9O95484 217 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 S100A9P06702 114 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 NTSP30990 170 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 LEPRP48357 1165 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 C21orf59P57076 290 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CLCQ05315 142 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NR1D2Q14995 579 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TRIP10Q15642 601 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 PGS1Q32NB8 556 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TMEM240Q5SV17 173 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 INTS11Q5TA45 600 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 NCEH1Q6PIU2 408 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 RANBP10Q6VN20 620 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ARHGAP36Q6ZRI8 547 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 AMZ2Q86W34 360 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CPNE9Q8IYJ1 553 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NRSN1Q8IZ57 195 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NXPE1Q8N323 547 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NSMCE2Q96MF7 247 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 DERL2Q9GZP9 239 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 IL1RL2Q9HB29 575 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 SLCO1B3Q9NPD5 702 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 FARSBQ9NSD9 589 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 B4GALT6Q9UBX8 382 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CAPN8A6NHC0 703 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 H0YGN5 161 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 HOXB2P14652 356 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 EPCAMP16422 314 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 EN2P19622 333 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 ACADVLP49748 655 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ANXA8L1Q5VT79 327 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CHSY3Q70JA7 882 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ERN2Q76MJ5 926 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 HORMAD1Q86X24 394 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ACTRT2Q8TDY3 377 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 FERD3LQ96RJ6 166 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MIPEPQ99797 713 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms