RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 AIFM2Q9BRQ8 373 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ULBP1Q9BZM6 244 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 SYTL2Q9HCH5 934 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 EXD2Q9NVH0 621 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 MN1Q10571 1320 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 TCRBV5S2A0A599 114 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC1A7O00341 560 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 B3GAT3O94766 335 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 LRIG2O94898 1065 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 WARSP23381 471 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 PSMB9P28065 219 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 NUDT1P36639 197 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FRG1Q14331 258 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TIGD5Q53EQ6 642 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SDE2Q6IQ49 451 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 RBM23Q86U06 439 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 LGALS12Q96DT0 336 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 UBXN10Q96LJ8 280 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF670Q9BS34 389 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 C1QTNF1Q9BXJ1 281 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 PIGVQ9NUD9 493 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 DTLQ9NZJ0 730 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 MAT2BQ9NZL9 334 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 POLHQ9Y253 713 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 PABPN1LA6NDY0 278 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 CCDC154A6NI56 674 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 MSL3P1P0C860 447 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 S100A5P33763 92 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 POU6F2P78424 691 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TTC23Q5W5X9 447 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 LIMS2Q7Z4I7 341 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 HID1Q8IV36 788 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 YIPF6Q96EC8 236 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ZHX1-C8orf76Q96EF9 292 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SMOQ99835 787 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 OSBPL2Q9H1P3 480 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM118AQ9NWS6 357 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 OPTCQ9UBM4 332 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 OSGIN1Q9UJX0 560 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ZFC3H1O60293 1989 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 KRT87PA6NCN2 255 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM72CH0Y354 149 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 H0Y626 953 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 GABRDO14764 452 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 XPNPEP2O43895 674 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ITGB1P05556 798 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 CES1P23141 567 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC6A2P23975 617 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 PIGAP37287 484 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 DDOSTP39656 456 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 KRR1Q13601 381 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 GRM3Q14832 879 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TYSND1Q2T9J0 566 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 KIF19Q2TAC6 998 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TBRG1Q3YBR2 411 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF404Q494X3 552 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TSTD2Q5T7W7 516 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM72AQ5TYM5 149 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 NCBP2-AS2Q69YL0 99 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM72DQ6L9T8 149 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 RPS27LQ71UM5 84 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM72BQ86X60 149 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 ZMIZ2Q8NF64 920 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 MEAF6Q9HAF1 191 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 NTN4Q9HB63 628 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
GTF3C1-203ENST00000562609 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 FXYD1O00168 92 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC4A1P02730 911 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 FCGRTP55899 365 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 DEFA1P59665 94 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 DEFA3P59666 94 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC25A52Q3SY17 297 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 GALNT6Q8NCL4 622 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 PAPD5Q8NDF8 572 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 TMEM209Q96SK2 561 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 MRPL9Q9BYD2 267 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 SNX10Q9Y5X0 201 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 MAGEB16A2A368 324 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 FADS2P1A8MWK0 482 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 TARM1B6A8C7 271 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 ANGPT2O15123 496 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 CA12O43570 354 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 MFSD11O43934 449 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 RBP1P09455 135 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 GSTM1P09488 218 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms